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OQ240257.1__WEU69557.1__X__00006

Bact-Vir

OQ240257.1__WEU69557.1__X__00006

Identity

Accession:
OQ240257 ↗
Kingdom:
phage

Quality

92.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Latilactobacillus_phage_TMW_1.1365_P3

TaxID: 3027586

Cluster

View cluster (28 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-84
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.77 58.0 4.81e-01 80.0% 48.4%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.75 57.0 5.80e-01 80.0% 84.7%
3qaoA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.75 57.0 4.56e-01 80.0% 43.6%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.74 56.0 4.73e-01 80.0% 49.6%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.74 55.0 4.77e-01 78.7% 53.1%
3ucsA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.73 58.0 5.23e-01 84.0% 64.6%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.73 55.0 5.78e-01 80.0% 89.6%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 48.0 3.78e-01 70.7% 57.6%
3clmA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 57.0 3.64e-01 90.7% 50.3%
4b43A01 1.10.10.2480 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.65 45.0 4.71e-01 72.0% 83.8%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 43.0 3.63e-01 70.7% 69.0%
3jw4A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 35.0 2.99e-01 97.3% 32.0%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 40.0 3.60e-01 72.0% 66.0%
2fa5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 41.0 3.36e-01 74.7% 65.5%
3nrvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 3.59e-01 81.3% 72.1%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 39.0 3.68e-01 76.0% 94.7%
1gkuB06 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.55 46.0 3.69e-01 94.7% 60.3%
4gcvC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 3.18e-01 74.7% 40.4%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 3.57e-01 70.7% 72.7%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 44.0 3.60e-01 90.7% 54.3%
1u9pA00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.53 42.0 3.97e-01 92.0% 91.7%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 36.0 2.99e-01 70.7% 62.3%
2ijlB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 45.0 3.98e-01 96.0% 67.0%
2mc3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.39e-01 77.3% 81.6%
1mw9X02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.51 43.0 3.41e-01 96.0% 58.3%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 4.08e-01 90.7% 90.5%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 43.0 3.61e-01 92.0% 58.1%
6opmD01 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.50 41.0 2.98e-01 93.3% 68.5%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4547937 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.94 65.0 7.44e-01 72.0% 94.8%
4191032 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.93 60.0 7.35e-01 72.0% 100.0%
3954117 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.92 64.0 6.14e-01 72.0% 64.7%
3281256 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.89 63.0 6.16e-01 73.3% 71.2%
3953197 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.87 62.0 5.66e-01 73.3% 60.0%
3289439 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.87 60.0 6.90e-01 73.3% 96.4%
5075144 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.86 61.0 6.12e-01 73.3% 92.0%
3958314 101.1.9.66 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Rv2175c_wHTH 0.82 53.0 6.04e-01 76.0% 89.1%
3840108 101.1.9.95 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF3972 0.82 57.0 6.21e-01 72.0% 91.7%
4548007 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.81 60.0 5.77e-01 77.3% 68.2%
3838564 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.80 60.0 6.62e-01 78.7% 98.3%
5002797 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.78 55.0 6.09e-01 81.3% 91.7%
5073619 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.78 56.0 5.96e-01 74.7% 96.9%
4682727 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.77 53.0 6.07e-01 72.0% 98.2%
3976015 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.76 58.0 5.69e-01 84.0% 75.0%
3966930 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.76 57.0 4.93e-01 78.7% 54.5%
3281873 101.1.9.84 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR_1 0.75 58.0 4.04e-01 84.0% 26.5%
3288205 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.75 57.0 5.61e-01 80.0% 75.0%
3943313 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.75 57.0 4.89e-01 80.0% 53.0%
4995042 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.75 59.0 5.70e-01 84.0% 87.1%
3284986 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.75 56.0 4.70e-01 82.7% 49.2%
4334333 101.1.9.1 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR,MerR-DNA-bind 0.74 56.0 4.52e-01 80.0% 42.9%
3387406 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.74 57.0 5.05e-01 84.0% 58.1%
3974460 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.74 55.0 4.54e-01 80.0% 45.4%
4254112 101.1.9.18 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_2 0.74 57.0 5.34e-01 84.0% 67.8%
3587879 101.1.9.36 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.74 57.0 5.00e-01 84.0% 56.4%
3948487 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.73 56.0 4.54e-01 80.0% 45.2%
5007668 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.73 55.0 4.64e-01 80.0% 48.0%
3975516 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.73 56.0 4.92e-01 81.3% 57.1%
3280706 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.72 55.0 5.44e-01 84.0% 76.2%
3286117 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.72 54.0 4.54e-01 80.0% 48.0%
3965785 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.70 49.0 5.05e-01 81.3% 78.6%
2876157 101.1.9.105 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › PF30176 0.68 46.0 5.23e-01 73.3% 100.0%
4553544 3601.1.1.1 ↗ alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Ad_Cy_reg 0.67 51.0 3.77e-01 84.0% 31.3%
4064277 101.1.9.8 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.65 45.0 4.85e-01 73.3% 84.6%
4100614 101.1.9.8 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.64 43.0 4.85e-01 74.7% 94.5%
4597624 3601.1.1.1 ↗ alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Ad_Cy_reg 0.63 49.0 3.85e-01 84.0% 39.4%
4390858 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.62 40.0 4.59e-01 74.7% 98.0%
4507097 3601.1.1.1 ↗ alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Ad_Cy_reg 0.62 47.0 3.82e-01 84.0% 42.8%
4633347 101.1.9.8 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.61 40.0 4.67e-01 76.0% 100.0%
4970959 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 42.0 4.34e-01 72.0% 80.0%
4564509 101.1.9.8 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.61 43.0 4.65e-01 77.3% 93.3%
3948669 101.1.9.26 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like 0.60 48.0 4.18e-01 88.0% 85.2%
None — 0.57 44.0 2.70e-01 86.7% 40.2%
3825507 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 44.0 2.69e-01 86.7% 39.2%
4933914 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 37.0 3.71e-01 73.3% 68.8%
3815453 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.54 37.0 3.52e-01 70.7% 61.1%
4933806 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 39.0 3.05e-01 77.3% 66.5%
3180104 101.1.15.1 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.53 36.0 3.46e-01 70.7% 61.1%
3310101 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.53 36.0 3.18e-01 70.7% 49.6%
4049927 4044.1.1.1 ↗ alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane 0.52 45.0 4.22e-01 98.7% 96.8%
3812553 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.52 39.0 3.16e-01 80.0% 73.6%
3320650 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.51 35.0 3.26e-01 70.7% 57.0%
4352407 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 34.0 3.55e-01 73.3% 74.3%
3826771 101.1.2.396 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.51 38.0 3.22e-01 80.0% 69.6%