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OQ240257.1__WEU69609.1__X__00058
Bact-VirOQ240257.1__WEU69609.1__X__00058
Identity
- Accession:
- OQ240257 ↗
- Kingdom:
- phage
Quality
76.5
mean pLDDT
Taxonomy
TaxID: 3027586
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 264-404
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16872.11 best | putAbiC | 31.9 | 2.10e-07 | 62.4% | 55.0% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.60 | 30.0 | 3.97e-01 | 78.0% | 89.2% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 39.0 | 3.12e-01 | 75.9% | 33.2% |
| 2wviA00 | 1.25.40.430 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.59 | 37.0 | 3.56e-01 | 78.0% | 53.8% |
| 2qvaA01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.56 | 42.0 | 4.35e-01 | 77.3% | 88.4% |
| 2xppA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.55 | 41.0 | 4.20e-01 | 82.3% | 80.3% |
| 4aifA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 39.0 | 3.90e-01 | 73.8% | 81.2% |
| 1s35A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 37.0 | 4.13e-01 | 87.2% | 91.8% |
| 2fbnA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 36.0 | 3.58e-01 | 80.1% | 64.7% |
| 3g5uA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.52 | 43.0 | 2.83e-01 | 92.2% | 92.4% |
| 3ro3A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 33.0 | 3.23e-01 | 78.0% | 57.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3391548 | 109.4.1.901 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_GCN1 | 0.59 | 41.0 | 4.00e-01 | 79.4% | 62.5% |
| 3581177 | 109.4.1.148 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EST1_DNA_bind,EST1 | 0.58 | 47.0 | 3.66e-01 | 88.7% | 57.2% |
| 3223407 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 37.0 | 3.80e-01 | 84.4% | 66.7% |
| 3385417 | 109.4.1.1289 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30856 | 0.58 | 45.0 | 3.12e-01 | 85.1% | 40.9% |
| 3818455 | 109.4.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SYMPK_PTA1_N | 0.56 | 43.0 | 2.76e-01 | 82.3% | 15.6% |
| 3786264 | 109.4.1.1237 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NTS_TR130 | 0.52 | 34.0 | 3.58e-01 | 83.7% | 72.0% |
D2
medium
residues 109-137_196-263
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dylA02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.66 | 39.0 | 3.95e-01 | 100.0% | 59.6% |
| 4uqxA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 39.0 | 4.11e-01 | 88.7% | 65.2% |
| 3vadA01 | 1.20.140.20 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Alpha-ketoacid/pyruvate dehydrogenase kinase, N-terminal domain | 0.61 | 53.0 | 4.60e-01 | 99.0% | 74.4% |
| 1lqsL01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.58 | 46.0 | 4.59e-01 | 99.0% | 84.0% |
| 1zbpA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 39.0 | 4.14e-01 | 90.7% | 78.8% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.56 | 47.0 | 4.49e-01 | 93.8% | 94.0% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.56 | 41.0 | 4.37e-01 | 99.0% | 89.2% |
| 4gx0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 41.0 | 4.10e-01 | 100.0% | 74.8% |
| 4dxwA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 42.0 | 4.08e-01 | 100.0% | 72.3% |
| 4iggB02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.54 | 43.0 | 4.03e-01 | 88.7% | 69.4% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 42.0 | 4.13e-01 | 86.6% | 99.0% |
| 2x0cA01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.52 | 42.0 | 3.49e-01 | 88.7% | 56.7% |
| 3lbxB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 41.0 | 4.01e-01 | 85.6% | 98.1% |
| 2d2sA02 | 1.20.58.1220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, C-terminal helical domain | 0.52 | 42.0 | 4.14e-01 | 85.6% | 85.1% |
| 1avoB00 | 1.20.120.180 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain | 0.52 | 36.0 | 3.24e-01 | 72.2% | 81.4% |
| 6vddA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.51 | 41.0 | 3.89e-01 | 100.0% | 72.2% |
| 3fb2A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 43.0 | 4.19e-01 | 91.8% | 97.1% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 29.0 | 3.13e-01 | 93.8% | 64.7% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.50 | 37.0 | 3.45e-01 | 99.0% | 61.1% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3823576 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.62 | 53.0 | 4.63e-01 | 94.8% | 75.2% |
| 3423702 | 633.4.1.0 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor | 0.62 | 55.0 | 4.65e-01 | 99.0% | 71.9% |
| 3414605 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.60 | 54.0 | 4.85e-01 | 100.0% | 83.7% |
| 3620170 | 7015.1.1.1 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC | 0.58 | 50.0 | 4.42e-01 | 100.0% | 88.7% |
| 3892232 | 633.1.1.0 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain | 0.57 | 46.0 | 4.49e-01 | 94.8% | 80.0% |
| 4941192 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.56 | 40.0 | 3.63e-01 | 72.2% | 59.2% |
| 3755118 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.53 | 44.0 | 4.18e-01 | 90.7% | 93.0% |
| 3522864 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.53 | 43.0 | 4.16e-01 | 88.7% | 94.5% |
| 3696715 | 610.3.1.1 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey | 0.52 | 34.0 | 2.64e-01 | 70.1% | 31.5% |
| 1097268 | 633.19.1.1 ↗ | alpha bundles › Bromodomain-like › Hypothetical protein lpg2422 helical bundle domain › Hypothetical protein lpg2422 helical bundle domain › DUF6842 | 0.52 | 39.0 | 4.10e-01 | 84.5% | 91.7% |
| 3923407 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.52 | 45.0 | 4.30e-01 | 91.8% | 94.5% |
| 3484907 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 42.0 | 3.96e-01 | 88.7% | 88.3% |
| 3872563 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.51 | 42.0 | 3.98e-01 | 87.6% | 89.6% |
| 3559718 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.51 | 42.0 | 4.09e-01 | 88.7% | 96.4% |
| 3242447 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 42.0 | 4.13e-01 | 88.7% | 99.0% |
| 3929285 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.51 | 43.0 | 4.33e-01 | 91.8% | 100.0% |
| 3543903 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.51 | 42.0 | 4.07e-01 | 88.7% | 93.6% |
| 3715230 | 601.1.2.82 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › GPI2 | 0.51 | 43.0 | 3.51e-01 | 95.9% | 94.7% |
| 3778716 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.51 | 42.0 | 4.09e-01 | 89.7% | 99.0% |
| 4939850 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.50 | 35.0 | 3.31e-01 | 72.2% | 61.0% |
D3
medium
residues 138-195