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OQ240260.1__WCZ54988.1__X__00009

Bact-Vir

OQ240260.1__WCZ54988.1__X__00009

Identity

Accession:
OQ240260 ↗
Kingdom:
phage

Quality

80.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Latilactobacillus_phage_TMW_1.2272_P1

TaxID: 3027589

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-84
PDB
Domain cluster: rep: LN885237.1__CUQ99450.1__BN20_027__00027__D28-78
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.72 61.0 5.01e-01 98.3% 81.4%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.72 62.0 4.92e-01 100.0% 70.6%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.68 59.0 4.72e-01 100.0% 69.4%
3gp4B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.67 59.0 4.59e-01 100.0% 68.5%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.65 55.0 5.35e-01 100.0% 95.5%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 4.00e-01 81.4% 59.2%
2e1mA05 1.10.405.10 Mainly Alpha › Orthogonal Bundle › Guanine Nucleotide Dissociation Inhibitor; domain 1 › Guanine Nucleotide Dissociation Inhibitor, domain 1 0.60 42.0 3.71e-01 89.8% 48.4%
3mq0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 3.90e-01 86.4% 59.7%
2xfvA00 3.10.260.30 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › 0.58 44.0 3.69e-01 84.7% 60.2%
6jzaA00 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.57 29.0 2.66e-01 91.5% 32.1%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 45.0 4.30e-01 89.8% 73.6%
6opmD01 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.57 46.0 3.23e-01 100.0% 63.0%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 4.04e-01 84.7% 69.9%
2napA03 3.40.228.10 Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 0.56 45.0 3.08e-01 93.2% 93.3%
1epwA01 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.56 44.0 2.66e-01 88.1% 40.0%
1t3aA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.56 44.0 2.69e-01 88.1% 38.0%
4fe9A01 2.60.40.3640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 43.0 3.48e-01 89.8% 60.8%
3iayA06 6.10.140.1540 Special › Helix non-globular › Helix Hairpins › 0.54 34.0 3.98e-01 78.0% 100.0%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 40.0 3.87e-01 84.7% 72.2%
2fpqA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.53 41.0 2.55e-01 88.1% 40.8%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.24e-01 93.2% 36.4%
4xr7F02 1.10.287.3700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 35.0 3.10e-01 71.2% 60.0%
2vqmA00 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.52 39.0 2.51e-01 88.1% 72.4%
2zj2A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 3.67e-01 89.8% 76.2%
2q3fA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 42.0 3.11e-01 96.6% 92.7%
2p1aB01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.51 43.0 3.34e-01 100.0% 96.6%
2jiiA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.51 40.0 2.87e-01 91.5% 44.0%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3589467 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.83 67.0 5.86e-01 89.8% 60.0%
5082561 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.80 61.0 6.50e-01 84.7% 96.0%
3952885 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.78 61.0 6.59e-01 88.1% 100.0%
4933561 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.77 60.0 6.21e-01 84.7% 89.1%
5047649 101.1.9.36 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.77 61.0 6.52e-01 89.8% 100.0%
4547937 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.77 67.0 6.75e-01 100.0% 98.3%
3979434 101.1.9.101 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF1441 0.76 61.0 6.31e-01 91.5% 94.5%
5070666 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.76 60.0 6.24e-01 91.5% 94.5%
3960483 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.75 58.0 6.19e-01 89.8% 98.0%
3960386 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.74 59.0 5.95e-01 86.4% 95.0%
5064906 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.74 60.0 6.23e-01 93.2% 94.5%
2168161 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.74 59.0 5.98e-01 86.4% 91.2%
4668740 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.73 61.0 5.08e-01 93.2% 52.4%
4994568 101.1.9.36 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.72 57.0 5.92e-01 93.2% 94.5%
4992437 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.71 53.0 5.35e-01 89.8% 80.0%
5007668 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.70 61.0 4.80e-01 98.3% 72.0%
3975516 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.70 60.0 4.97e-01 96.6% 82.9%
5000254 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.70 54.0 5.80e-01 89.8% 100.0%
3289439 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.70 56.0 5.75e-01 93.2% 96.4%
3282088 101.1.9.84 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR_1 0.70 61.0 5.21e-01 98.3% 71.6%
4101677 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.70 62.0 4.75e-01 100.0% 48.9%
4932995 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.69 54.0 5.75e-01 89.8% 100.0%
5041445 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.69 61.0 5.31e-01 100.0% 74.4%
3972191 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.69 59.0 4.49e-01 98.3% 40.7%
3387406 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.69 60.0 5.03e-01 100.0% 63.8%
3284779 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.69 58.0 4.59e-01 96.6% 76.8%
1827815 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.68 60.0 5.78e-01 100.0% 94.1%
1844183 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.68 59.0 4.62e-01 100.0% 67.4%
4470278 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.67 57.0 4.69e-01 98.3% 76.5%
3284986 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.67 58.0 4.63e-01 98.3% 54.2%
3589820 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.67 57.0 4.56e-01 98.3% 70.4%
4284807 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.67 58.0 4.39e-01 96.6% 60.7%
4334333 101.1.9.1 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR,MerR-DNA-bind 0.67 58.0 4.45e-01 100.0% 63.6%
4008376 101.1.9.16 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.67 55.0 5.52e-01 93.2% 95.0%
3279459 101.1.9.82 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.66 56.0 4.51e-01 98.3% 74.0%
3989255 101.1.9.141 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF536, HTH_24 0.66 51.0 3.79e-01 89.8% 31.9%
4266122 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.66 57.0 4.89e-01 98.3% 73.7%
3588934 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.66 52.0 5.07e-01 91.5% 81.5%
4518241 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.65 57.0 5.31e-01 100.0% 88.0%
4090636 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.65 54.0 5.16e-01 96.6% 87.1%
4051681 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.65 54.0 4.22e-01 96.6% 44.4%
4126330 101.1.9.33 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF536 0.65 49.0 3.81e-01 89.8% 35.2%
4520820 101.1.9.17 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.64 55.0 5.14e-01 98.3% 84.0%
3395505 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.62 28.0 3.18e-01 89.8% 51.1%
4948782 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.60 46.0 4.27e-01 84.7% 66.7%
4933456 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.59 46.0 4.22e-01 86.4% 63.7%
5031624 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.57 44.0 3.93e-01 86.4% 56.7%
4965087 101.1.2.909 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF5797 0.57 42.0 4.00e-01 79.7% 71.4%
4943612 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 44.0 3.55e-01 86.4% 42.5%
3809781 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.57 29.0 2.68e-01 91.5% 32.9%
4946594 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 44.0 3.76e-01 86.4% 51.0%
5009810 101.1.2.927 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.57 43.0 4.01e-01 86.4% 63.7%
None — 0.56 29.0 2.94e-01 91.5% 43.3%
4374831 101.1.1.282 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF222 0.55 43.0 3.41e-01 88.1% 69.2%
5051539 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.55 42.0 3.49e-01 86.4% 44.3%
3788382 101.1.15.0 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.55 44.0 4.08e-01 94.9% 76.2%
4928071 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.55 44.0 2.95e-01 100.0% 50.6%
4307573 379.1.1.3 ↗ few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 0.55 28.0 2.98e-01 89.8% 50.0%
3624335 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 42.0 3.08e-01 88.1% 77.1%
3651728 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.74e-01 89.8% 67.8%
5077994 101.1.2.927 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.53 44.0 3.44e-01 96.6% 41.4%
5077394 101.1.2.927 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.53 40.0 3.37e-01 86.4% 45.2%
5053312 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 44.0 3.84e-01 100.0% 63.2%
3176868 129.1.1.102 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › PF30133 0.52 37.0 2.91e-01 83.1% 48.1%
5054005 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 40.0 3.62e-01 91.5% 73.3%
4932765 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 41.0 3.24e-01 93.2% 56.4%
5047904 101.1.2.178 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.51 39.0 3.58e-01 91.5% 74.4%
3481078 379.1.1.1 ↗ few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_1 0.51 26.0 3.31e-01 100.0% 75.8%
3661809 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.50 34.0 3.33e-01 71.2% 67.7%