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OQ259508.1__WDS60546.1__BC6_00031__00031
Bact-VirOQ259508.1__WDS60546.1__BC6_00031__00031
Identity
- Accession:
- OQ259508 ↗
- Kingdom:
- phage
Quality
71.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-49
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7tj9A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.77 | 67.0 | 5.25e-01 | 100.0% | 46.2% |
| 6tkvA01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.76 | 64.0 | 5.84e-01 | 100.0% | 75.0% |
| 3iylU02 | 1.10.287.1520 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 56.0 | 5.45e-01 | 85.7% | 86.8% |
| 4mk3A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.71 | 62.0 | 4.71e-01 | 100.0% | 43.5% |
| 1u5eA01 | 6.10.250.220 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 56.0 | 5.54e-01 | 100.0% | 94.3% |
| 2p4vA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.67 | 54.0 | 4.90e-01 | 100.0% | 72.4% |
| 4b7yD00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 52.0 | 4.36e-01 | 100.0% | 68.0% |
| 2lrrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.61 | 40.0 | 3.55e-01 | 83.7% | 47.1% |
| 2lklA01 | 1.10.1900.40 | Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › Acidic terminal segments, variant surface antigen of PfEMP1 | 0.58 | 44.0 | 3.93e-01 | 83.7% | 56.9% |
| 6cgvM01 | 1.20.120.1500 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pre-hexon-linking protein IIIa | 0.58 | 46.0 | 3.49e-01 | 100.0% | 34.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5048467 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 69.0 | 4.92e-01 | 100.0% | 35.9% |
| 5035291 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 68.0 | 4.94e-01 | 100.0% | 38.5% |
| 3544073 | 207.1.1.63 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6,LRR_8 | 0.77 | 68.0 | 3.90e-01 | 100.0% | 10.3% |
| 3749862 | 605.1.1.178 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › TMEM215 | 0.76 | 66.0 | 6.19e-01 | 98.0% | 100.0% |
| 3395965 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.76 | 62.0 | 6.00e-01 | 89.8% | 85.5% |
| 4591712 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.70 | 57.0 | 4.07e-01 | 100.0% | 29.1% |
| 5004859 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.69 | 57.0 | 5.75e-01 | 100.0% | 100.0% |
| 3360848 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 58.0 | 3.70e-01 | 100.0% | 20.0% |
| 3876167 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.68 | 56.0 | 3.95e-01 | 100.0% | 62.9% |
| 4999143 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.67 | 52.0 | 3.56e-01 | 83.7% | 26.7% |
| 3410177 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 47.0 | 3.66e-01 | 93.9% | 61.0% |