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OQ267593.1__WDQ26636.1__phiKPNH21_00023__00023
Bact-VirOQ267593.1__WDQ26636.1__phiKPNH21_00023__00023
Identity
- Accession:
- OQ267593 ↗
- Kingdom:
- phage
Quality
73.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-50
D2
high
residues 67-108
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vq8P03 | 1.10.1200.60 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › | 0.71 | 56.0 | 5.27e-01 | 95.2% | 81.8% |
| 4zqeA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.66 | 53.0 | 4.27e-01 | 100.0% | 74.0% |
| 1cmjA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.62 | 49.0 | 2.93e-01 | 100.0% | 13.3% |
| 2o5rA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.61 | 46.0 | 4.57e-01 | 97.6% | 97.9% |
| 1qrvA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.59 | 40.0 | 3.51e-01 | 73.8% | 43.8% |
| 1lp1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.57 | 44.0 | 4.18e-01 | 97.6% | 78.2% |
| 2ffjA01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.56 | 46.0 | 4.31e-01 | 100.0% | 92.9% |
| 1z2zA03 | 1.10.1510.30 | Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › | 0.50 | 38.0 | 3.12e-01 | 97.6% | 39.3% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4573573 | 166.1.1.1 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C | 0.70 | 57.0 | 4.65e-01 | 100.0% | 84.4% |
| 3226006 | 367.1.1.2 ↗ | few secondary structure elements › Insulin-like › Insulin-like › Insulin-like › Ins_beta | 0.69 | 55.0 | 5.49e-01 | 100.0% | 88.9% |
| 4651138 | 4957.1.1.0 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit | 0.67 | 53.0 | 4.85e-01 | 95.2% | 70.0% |
| 3596323 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.66 | 54.0 | 4.54e-01 | 100.0% | 76.2% |
| 3246155 | 367.1.1.2 ↗ | few secondary structure elements › Insulin-like › Insulin-like › Insulin-like › Ins_beta | 0.62 | 47.0 | 4.59e-01 | 100.0% | 80.0% |