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OQ267593.1__WDQ26645.1__phiKPNH21_00032__00032

Bact-Vir

OQ267593.1__WDQ26645.1__phiKPNH21_00032__00032

Identity

Accession:
OQ267593 ↗
Kingdom:
phage

Quality

85.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Klebsiella_phage_phi_KPN_H2

TaxID: 3028470

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 34-100
PDB
Domain cluster: rep: MK095605.1__AZS06274.1__MED16_gp34__00034__D40-120
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24886.2 best DUF7740 50.1 3.60e-13 86.6% 87.9%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2oxlA00 1.20.5.5260 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.74 50.0 5.24e-01 70.1% 80.6%
2crbA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.72 49.0 4.35e-01 70.1% 64.9%
3iqcA00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.72 60.0 4.99e-01 92.5% 79.8%
1vjxA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.72 53.0 4.04e-01 77.6% 90.6%
1sr2A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.70 59.0 4.91e-01 92.5% 60.3%
2rpaA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.70 47.0 4.51e-01 70.1% 81.8%
3uumA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 47.0 3.86e-01 70.1% 73.8%
3t6gB00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.69 59.0 4.78e-01 97.0% 95.5%
4wzxA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.69 47.0 4.54e-01 70.1% 81.3%
4r42A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.68 53.0 3.85e-01 85.1% 81.3%
1dd9A03 1.20.50.20 Mainly Alpha › Up-down Bundle › Pheromone ER-1 › DnaG, RNA polymerase domain, helical bundle 0.66 46.0 4.81e-01 73.1% 84.7%
4g3aB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.64 43.0 2.98e-01 70.1% 29.5%
8jpdG01 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.63 54.0 4.29e-01 100.0% 53.1%
3hdiA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.62 45.0 3.25e-01 77.6% 67.7%
2gw1A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 47.0 2.94e-01 95.5% 17.8%
3nz4B03 1.10.274.20 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 0.55 39.0 3.48e-01 77.6% 62.5%
5dikA00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.54 39.0 3.35e-01 77.6% 54.5%
3b4qA00 1.10.1200.100 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › conserved protein domain from corynebacterium diphtheriae 0.54 42.0 3.95e-01 91.0% 79.3%
1owlA02 1.25.40.80 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 45.0 3.71e-01 100.0% 78.9%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4547686 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.82 56.0 5.58e-01 71.6% 74.3%
3558834 604.12.1.6 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › NRBF2_MIT 0.78 53.0 4.73e-01 70.1% 67.8%
1711732 601.2.1.7 ↗ alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › HBM 0.77 53.0 4.29e-01 70.1% 56.7%
3884438 604.12.1.1 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.77 52.0 4.90e-01 70.1% 75.0%
4933335 604.12.1.1 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.76 52.0 4.90e-01 70.1% 75.0%
3480265 604.12.1.1 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.76 51.0 4.86e-01 70.1% 75.0%
4567796 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.74 54.0 5.23e-01 76.1% 77.3%
3402110 604.12.1.1 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.73 49.0 4.37e-01 70.1% 63.2%
3507780 604.12.1.8 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › KATNA1_MIT 0.71 48.0 4.46e-01 70.1% 74.1%
3508614 601.1.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Vinculin 0.71 57.0 4.50e-01 89.6% 82.8%
3604577 2004.1.1.439 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF26341 0.67 59.0 4.11e-01 100.0% 65.8%
3718849 604.1.1.51 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DHC_N1 0.61 47.0 3.25e-01 97.0% 27.7%
4982026 150.1.1.209 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › DUF7121 0.60 40.0 3.28e-01 71.6% 50.7%
3358885 604.12.1.8 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › KATNA1_MIT 0.56 39.0 3.74e-01 74.6% 76.2%