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OQ267593.1__WDQ26711.1__phiKPNH21_00099__00098

Bact-Vir

OQ267593.1__WDQ26711.1__phiKPNH21_00099__00098

Identity

Accession:
OQ267593 ↗
Kingdom:
phage

Quality

81.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-45
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p4bB02 3.30.200.100 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain 0.75 67.0 5.13e-01 100.0% 49.0%
2iz4A01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.75 56.0 5.50e-01 84.1% 100.0%
4jhyA00 3.30.530.80 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.75 63.0 4.29e-01 95.5% 57.7%
3u6xS00 2.60.40.3320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.75 61.0 4.58e-01 90.9% 75.2%
3d8kD00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.72 61.0 3.66e-01 100.0% 25.1%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.72 43.0 3.96e-01 100.0% 44.8%
3v10A01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.72 63.0 4.27e-01 100.0% 59.1%
4mjgA00 3.30.2030.30 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.72 61.0 4.10e-01 100.0% 49.7%
2jpiA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.71 57.0 4.49e-01 90.9% 62.5%
3h0gH00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 60.0 4.38e-01 100.0% 63.7%
4nehA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.69 53.0 3.10e-01 86.4% 99.0%
3hlzB01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.69 60.0 4.23e-01 100.0% 58.6%
3r1kA03 3.30.1050.10 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain 0.68 49.0 3.94e-01 81.8% 43.8%
3tfmA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 55.0 4.10e-01 90.9% 69.7%
3ms6A00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.67 57.0 4.63e-01 100.0% 92.2%
2w42B02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.67 53.0 3.41e-01 93.2% 33.3%
2f68X01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 57.0 4.06e-01 100.0% 62.3%
4wxaA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.67 54.0 4.40e-01 90.9% 59.5%
3zg9B02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.65 56.0 3.33e-01 100.0% 87.9%
3f2bA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 43.0 3.30e-01 100.0% 30.2%
2dm7A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 56.0 4.49e-01 100.0% 60.2%
2gu9A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 55.0 4.25e-01 100.0% 81.6%
5jciA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.64 53.0 4.29e-01 97.7% 57.3%
4fflA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.63 52.0 3.28e-01 97.7% 52.5%
3e5zA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.63 52.0 3.22e-01 97.7% 97.6%
1x44A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 52.0 4.06e-01 100.0% 51.5%
1hn0A04 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.62 54.0 3.93e-01 100.0% 56.6%
2di7A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 49.0 3.88e-01 100.0% 62.6%
1wzaA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 50.0 4.24e-01 100.0% 81.0%
5hy7B02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 46.0 2.85e-01 90.9% 96.5%
4eo0A00 3.30.110.160 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › 0.59 47.0 3.60e-01 90.9% 94.3%
2kv8A00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.58 44.0 3.77e-01 90.9% 95.2%
2e6qA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 49.0 3.74e-01 100.0% 55.4%
4gc1A01 2.90.10.10 Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain 0.58 43.0 3.52e-01 100.0% 39.4%
2eeiA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.57 47.0 3.66e-01 97.7% 79.2%
2dluA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.57 46.0 3.47e-01 90.9% 77.5%
4e2oA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.57 48.0 3.94e-01 100.0% 76.1%
7esdB01 2.60.40.350 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 44.0 3.76e-01 100.0% 66.3%
1o7dC02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.57 44.0 3.69e-01 95.5% 56.2%
2zoeB02 2.60.120.1080 Mainly Beta › Sandwich › Jelly Rolls › 0.56 45.0 3.27e-01 100.0% 69.1%
3ggeB00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.56 43.0 3.52e-01 90.9% 91.3%
1ufxA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.56 42.0 3.48e-01 95.5% 89.3%
1shyB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 43.0 2.54e-01 97.7% 99.6%
3dhuA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 48.0 4.03e-01 100.0% 78.7%
1a66A00 2.60.40.340 Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain 0.54 43.0 2.96e-01 95.5% 32.6%
3kojB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 41.0 3.24e-01 100.0% 40.0%
2e7kA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.54 42.0 3.50e-01 95.5% 90.1%
5t89X01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 46.0 3.79e-01 100.0% 62.7%
3v8uA01 2.40.128.250 Mainly Beta › Beta Barrel › Lipocalin › 0.53 38.0 3.04e-01 90.9% 94.3%
3bpsA02 2.60.120.690 Mainly Beta › Sandwich › Jelly Rolls › Proprotein convertase subtilisin/kexin type 9 0.52 42.0 3.12e-01 100.0% 34.7%
3rfoA02 3.10.25.10 Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › Formyl transferase, C-terminal domain 0.52 40.0 3.23e-01 93.2% 53.3%
8hmcA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 43.0 2.59e-01 95.5% 21.8%
2wyhA05 2.60.40.2210 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 38.0 2.91e-01 90.9% 82.1%
3zfnA02 2.30.140.40 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain 0.50 40.0 3.77e-01 93.2% 93.0%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4251848 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.79 65.0 4.46e-01 90.9% 55.9%
3263502 331.4.1.9 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C 0.77 64.0 4.99e-01 90.9% 73.3%
4961531 881.4.1.0 a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB 0.77 66.0 4.98e-01 100.0% 53.6%
3672678 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.76 62.0 4.99e-01 88.6% 50.6%
3902817 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.76 60.0 3.55e-01 90.9% 98.9%
4938451 2484.1.1.80 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HypF_C 0.75 56.0 4.19e-01 81.8% 32.7%
3583765 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.74 65.0 3.68e-01 100.0% 21.2%
None 0.73 61.0 3.50e-01 93.2% 30.6%
4990159 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.73 59.0 3.49e-01 93.2% 63.8%
3994169 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.72 61.0 3.95e-01 100.0% 64.5%
4941704 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.72 58.0 4.15e-01 90.9% 67.4%
4013806 218.2.1.1 a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 0.72 58.0 3.66e-01 93.2% 62.1%
3189276 218.2.1.1 a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 0.72 58.0 3.80e-01 93.2% 59.6%
3587781 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.71 62.0 4.36e-01 97.7% 56.3%
4992460 222.1.1.43 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › DUF2103 0.71 57.0 4.58e-01 88.6% 52.3%
2106280 218.2.1.1 a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 0.71 56.0 3.93e-01 93.2% 91.6%
4281188 223.2.1.36 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_3 0.70 56.0 4.16e-01 93.2% 64.8%
5018772 304.55.2.0 a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like 0.70 59.0 4.65e-01 95.5% 49.5%
3299024 223.1.1.28 a+b three layers › Profilin-like › sensor domains › sensor domains › bHLH-MYC_N 0.70 60.0 4.06e-01 100.0% 76.0%
3793874 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.70 61.0 4.49e-01 100.0% 75.8%
2028786 218.2.1.1 a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 0.69 57.0 3.69e-01 97.7% 72.9%
4646590 1164.1.1.0 a+b two layers › Hypothetical virulence protein › Hypothetical virulence protein › Hypothetical virulence protein 0.68 56.0 4.18e-01 95.5% 42.5%
3513347 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 54.0 4.28e-01 88.6% 77.8%
3587590 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.67 56.0 4.32e-01 100.0% 66.7%
5024359 12.1.1.3 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amylase_C 0.66 57.0 4.76e-01 100.0% 71.2%
3719908 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.66 51.0 2.96e-01 86.4% 98.1%
3211867 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 51.0 3.88e-01 88.6% 62.7%
3265134 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 55.0 4.85e-01 100.0% 64.3%
5051533 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 51.0 3.88e-01 88.6% 70.9%
4979972 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 52.0 3.69e-01 88.6% 55.6%
4945363 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.64 58.0 4.44e-01 100.0% 87.4%
5024892 5.1.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed 0.64 49.0 3.28e-01 93.2% 20.5%
3487133 7.1.1.0 beta barrels › PDZ domain › PDZ domain › PDZ domain 0.63 50.0 3.81e-01 88.6% 87.6%
5074664 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 50.0 3.55e-01 90.9% 53.6%
1685099 1.1.7.51 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › NeqB_N 0.62 49.0 4.60e-01 100.0% 71.2%
4938313 244.2.1.7 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rubredoxin_C 0.62 52.0 4.47e-01 100.0% 62.7%
3738776 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 49.0 3.50e-01 88.6% 70.0%
4405937 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.61 53.0 4.36e-01 100.0% 76.5%
5018614 304.8.1.17 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › A9CJY8-like_N 0.60 47.0 4.36e-01 90.9% 69.1%
4927377 304.5.1.1 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › P-II 0.60 46.0 3.42e-01 84.1% 60.5%
3509818 11.1.5.37 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › muHD 0.59 50.0 3.65e-01 100.0% 84.6%
3262490 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 46.0 4.11e-01 100.0% 73.3%
3236944 864.1.1.5 a+b two layers › DLC › DLC › DLC › DUF684 0.58 50.0 4.15e-01 100.0% 72.5%
3908315 898.1.1.1 a+b two layers › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › Ribosomal_L1 0.56 42.0 3.25e-01 95.5% 45.4%
3263396 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.56 44.0 3.65e-01 90.9% 48.8%
3214659 898.1.1.1 a+b two layers › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › Ribosomal_L1 0.56 42.0 3.22e-01 90.9% 32.0%
5036992 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 43.0 3.48e-01 100.0% 58.2%
4111597 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.54 42.0 3.92e-01 100.0% 69.2%
3488591 7.1.1.1 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ 0.53 40.0 3.23e-01 90.9% 84.8%
3896559 929.1.1.0 beta duplicates or obligate multimers › Resistin › Resistin › Resistin 0.52 39.0 3.64e-01 86.4% 100.0%
3842436 12.5.1.2 beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › GPS 0.52 46.0 3.09e-01 100.0% 45.6%
4929030 304.5.1.1 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › P-II 0.51 38.0 3.03e-01 90.9% 60.9%