Back to structures

OQ267696.1__WDE69809.1__VPHZ6_orf00026__00026

Bact-Vir

OQ267696.1__WDE69809.1__VPHZ6_orf00026__00026

Identity

Accession:
OQ267696 ↗
Kingdom:
phage

Quality

67.4 mean pLDDT

Taxonomy

TaxID: 3028162

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-84
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kz6A01 6.10.140.1310 Special › Helix non-globular › Helix Hairpins › 0.63 42.0 4.23e-01 96.2% 67.9%
2vf8B02 1.20.1580.10 Mainly Alpha › Up-down Bundle › ABC transporter ATPase like fold › ABC transporter ATPase like domain 0.61 49.0 3.99e-01 90.0% 91.8%
3dfeA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 35.0 3.56e-01 83.7% 62.2%
1tuoA01 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.55 44.0 3.61e-01 87.5% 72.3%
7oslA02 3.40.50.12790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 0.55 31.0 2.94e-01 87.5% 45.0%
3v7iA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.54 35.0 2.87e-01 97.5% 35.4%
2h84A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.53 34.0 2.84e-01 95.0% 35.1%
6kvrA01 3.90.1300.10 Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain 0.53 43.0 2.61e-01 87.5% 79.7%
1s6yA02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.51 44.0 3.18e-01 98.8% 86.7%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4515771 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.65 46.0 4.30e-01 90.0% 59.0%
4398167 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.64 41.0 3.98e-01 80.0% 59.1%
4657257 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 55.0 3.01e-01 100.0% 35.0%
4665602 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 37.0 3.51e-01 76.2% 51.6%
3591468 3609.1.1.0 alpha arrays › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain › DNA repair protein RAD4 beta-hairpin domain 0.58 33.0 3.35e-01 88.7% 55.1%
3386282 4333.1.1.1 a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S 0.56 48.0 3.48e-01 98.8% 71.7%
3730580 4076.3.1.8 a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › PSF2_N 0.51 26.0 2.90e-01 78.8% 60.0%