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OQ267696.1__WDE69819.1__VPHZ6_orf00036__00036

Bact-Vir

OQ267696.1__WDE69819.1__VPHZ6_orf00036__00036

Identity

Accession:
OQ267696 ↗
Kingdom:
phage

Quality

79.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_VPHZ6

TaxID: 3028162

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-81
PDB
Domain cluster: rep: MK510993.1__QBI78971.1__X__00017__D4-83
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.93 67.0 7.72e-01 74.4% 100.0%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 71.0 7.65e-01 80.8% 94.0%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 60.0 6.94e-01 78.2% 91.4%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 71.0 7.60e-01 87.2% 100.0%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 60.0 6.98e-01 73.1% 100.0%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.87 68.0 4.85e-01 83.3% 31.1%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 66.0 6.81e-01 82.1% 84.0%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 65.0 7.14e-01 82.1% 100.0%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 67.0 7.02e-01 83.3% 92.9%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 64.0 6.41e-01 84.6% 78.8%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 66.0 6.82e-01 88.5% 91.7%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 66.0 6.72e-01 85.9% 88.2%
1y0uA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 63.0 6.00e-01 82.1% 74.2%
2p6rA03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.74 55.0 3.93e-01 78.2% 54.6%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 57.0 4.79e-01 84.6% 51.5%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 5.51e-01 85.9% 85.4%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 52.0 5.18e-01 82.1% 73.8%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 53.0 5.17e-01 80.8% 81.8%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.71 54.0 3.84e-01 80.8% 54.5%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.70 57.0 4.81e-01 88.5% 56.5%
2jrtA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 51.0 4.95e-01 76.9% 96.5%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 4.77e-01 87.2% 61.3%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.67 47.0 4.36e-01 82.1% 57.4%
4kibA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.44e-01 80.8% 69.7%
3d59A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 41.0 2.66e-01 74.4% 64.2%
5c8gB00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.53 39.0 3.44e-01 79.5% 92.3%
4neoA00 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.52 40.0 3.97e-01 82.1% 90.4%
4ojmX02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.51 42.0 3.87e-01 92.3% 94.3%
3of4A00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.51 44.0 3.25e-01 97.4% 51.2%
ECOD (90)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3944331 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.94 73.0 7.28e-01 80.8% 78.8%
3972360 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.93 68.0 7.74e-01 76.9% 98.3%
4008147 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.92 71.0 7.79e-01 84.6% 95.4%
3971414 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.92 68.0 7.74e-01 76.9% 100.0%
4404485 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.92 68.0 7.74e-01 76.9% 100.0%
165630 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.92 71.0 7.70e-01 80.8% 95.5%
3972272 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.92 73.0 7.47e-01 83.3% 86.7%
4321251 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.91 70.0 7.01e-01 80.8% 79.7%
4492035 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.90 70.0 7.37e-01 80.8% 90.0%
4606780 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.90 66.0 7.50e-01 79.5% 100.0%
3951084 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.90 67.0 7.10e-01 79.5% 87.1%
4661582 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.90 71.0 6.24e-01 83.3% 59.1%
4578719 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.90 65.0 7.25e-01 78.2% 93.7%
4009970 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 69.0 7.57e-01 84.6% 96.9%
2753461 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 69.0 6.99e-01 80.8% 82.9%
142817 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 70.0 7.28e-01 84.6% 88.9%
3289034 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 69.0 7.56e-01 80.8% 100.0%
3279672 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 72.0 7.40e-01 85.9% 90.7%
3946608 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.88 73.0 7.74e-01 87.2% 100.0%
4071326 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.88 70.0 7.02e-01 84.6% 82.5%
3290024 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 70.0 7.01e-01 84.6% 88.7%
2475319 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 71.0 7.60e-01 87.2% 100.0%
4030763 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 68.0 7.36e-01 82.1% 98.5%
3974013 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 63.0 7.10e-01 84.6% 98.3%
4007717 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 72.0 7.19e-01 87.2% 85.0%
3971990 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 67.0 6.47e-01 84.6% 74.1%
3945377 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 65.0 7.11e-01 82.1% 95.4%
3966025 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 69.0 7.10e-01 84.6% 89.2%
3953111 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 65.0 6.80e-01 78.2% 88.6%
4010691 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 59.0 6.94e-01 73.1% 100.0%
3941764 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 66.0 7.17e-01 83.3% 96.9%
3969657 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 69.0 7.04e-01 85.9% 88.0%
3975610 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 67.0 7.04e-01 82.1% 95.7%
4241531 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 66.0 6.97e-01 83.3% 91.4%
3978496 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 68.0 7.20e-01 84.6% 100.0%
3289143 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 66.0 6.38e-01 84.6% 74.1%
4131887 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 70.0 7.00e-01 88.5% 84.8%
2759 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 65.0 7.05e-01 82.1% 96.9%
3968151 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 68.0 6.57e-01 85.9% 76.5%
3971977 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.85 71.0 7.13e-01 89.7% 88.7%
3288592 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 65.0 7.01e-01 80.8% 96.9%
3962552 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.84 69.0 7.11e-01 87.2% 90.7%
3972270 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.84 65.0 6.84e-01 84.6% 91.4%
3947091 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.84 62.0 6.94e-01 76.9% 100.0%
3941460 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 63.0 6.88e-01 82.1% 95.4%
3976103 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 66.0 7.15e-01 85.9% 98.5%
3980681 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 76.0 7.57e-01 98.7% 100.0%
1177545 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 66.0 7.00e-01 83.3% 95.6%
3962431 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.84 66.0 6.75e-01 85.9% 86.7%
3942695 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 64.0 6.94e-01 79.5% 100.0%
3283074 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 67.0 6.51e-01 87.2% 77.6%
3286174 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 69.0 7.11e-01 89.7% 92.0%
3978081 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 68.0 6.73e-01 85.9% 86.3%
4314061 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.83 75.0 7.05e-01 97.4% 100.0%
4260337 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.83 76.0 7.04e-01 98.7% 98.9%
4937081 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.82 53.0 5.74e-01 75.6% 78.5%
3948900 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 64.0 6.57e-01 83.3% 86.7%
3968604 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 65.0 6.20e-01 87.2% 73.0%
2440126 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 74.0 7.24e-01 94.9% 98.8%
2332937 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 66.0 6.79e-01 85.9% 90.5%
3968864 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 67.0 6.84e-01 87.2% 93.3%
3282538 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 65.0 6.72e-01 89.7% 90.4%
3967757 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.81 69.0 7.06e-01 92.3% 94.7%
4321867 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.81 68.0 7.13e-01 96.2% 100.0%
4159688 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.81 67.0 7.03e-01 89.7% 98.6%
5022417 101.1.3.8 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 0.81 72.0 7.02e-01 100.0% 88.2%
138024 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.79 65.0 6.89e-01 91.0% 100.0%
4551350 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.78 65.0 6.10e-01 89.7% 75.8%
3977009 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.78 61.0 6.46e-01 83.3% 94.3%
5043001 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.78 61.0 5.49e-01 83.3% 73.3%
3981688 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.77 59.0 6.35e-01 85.9% 96.9%
3967340 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.77 59.0 5.67e-01 82.1% 80.0%
4395758 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.77 64.0 6.35e-01 89.7% 91.3%
3981690 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.76 65.0 6.09e-01 92.3% 81.1%
4004247 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.76 66.0 6.54e-01 96.2% 100.0%
4099721 101.1.3.24 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF27685 0.75 63.0 5.79e-01 91.0% 82.0%
3976506 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.75 64.0 6.52e-01 93.6% 96.0%
4486954 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.75 66.0 6.14e-01 94.9% 94.7%
4926820 101.1.2.150 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.75 57.0 5.43e-01 80.8% 74.4%
4998383 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.74 56.0 5.25e-01 80.8% 87.4%
4936653 4156.1.1.6 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.72 54.0 4.37e-01 79.5% 81.4%
4958468 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.72 50.0 5.61e-01 78.2% 95.0%
3286340 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.71 59.0 5.58e-01 89.7% 83.9%
4642479 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.70 57.0 5.37e-01 89.7% 78.9%
5010276 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.70 53.0 4.53e-01 83.3% 53.8%
3286796 101.1.3.4 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.68 58.0 5.44e-01 93.6% 98.9%
4604979 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.64 55.0 5.04e-01 96.2% 89.4%
4106860 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.63 57.0 5.33e-01 98.7% 95.8%
3512259 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.63 57.0 5.15e-01 100.0% 96.2%
4347676 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.61 55.0 5.28e-01 98.7% 98.9%