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OQ291024.1__WCZ56720.1__K22_019__00019

Bact-Vir

OQ291024.1__WCZ56720.1__K22_019__00019

Identity

Accession:
OQ291024 ↗
Kingdom:
phage

Quality

88.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sarkviridae› Jerseyvirus› Salmonella_phage_Kenya-K22

TaxID: 3027610

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 70-143
PDB
Domain cluster: rep: KU695582.1__AMQ66906.1__PBI_MCFLY_72__00069__D5-82
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ez2A01 1.10.1660.30 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.74 53.0 5.48e-01 98.6% 80.0%
1vwxg01 6.20.370.70 Special › Other non-globular › Rhinovirus 14, subunit 4 › 0.64 28.0 3.80e-01 83.8% 81.1%
3go5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 35.0 3.50e-01 87.8% 51.9%
7kfuC02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.62 42.0 2.99e-01 70.3% 51.1%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 49.0 3.97e-01 100.0% 44.5%
2pg4A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 53.0 4.95e-01 100.0% 76.9%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 50.0 4.49e-01 100.0% 63.8%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 48.0 4.18e-01 100.0% 59.8%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 47.0 3.66e-01 100.0% 39.9%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 50.0 4.67e-01 100.0% 77.2%
5xukA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.58 39.0 3.39e-01 70.3% 81.7%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 47.0 4.28e-01 100.0% 67.0%
3gdzB00 3.30.1360.70 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Arginyl tRNA synthetase N-terminal domain 0.57 41.0 3.73e-01 78.4% 95.3%
5suvC00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.56 41.0 3.49e-01 78.4% 81.6%
2wdoA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.55 43.0 3.69e-01 85.1% 81.3%
3gwmA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.55 38.0 3.20e-01 71.6% 82.9%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 41.0 3.96e-01 95.9% 70.1%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 35.0 3.55e-01 83.8% 65.3%
2obpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 4.46e-01 97.3% 85.2%
2af6A01 3.30.70.3180 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 37.0 3.07e-01 70.3% 79.4%
5xuhA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.54 40.0 3.40e-01 79.7% 81.6%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 3.42e-01 77.0% 84.3%
1v9kA00 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.54 38.0 2.76e-01 75.7% 43.2%
4e80C01 1.10.1410.10 Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › 0.53 47.0 3.40e-01 100.0% 44.2%
1p65A00 6.10.140.90 Special › Helix non-globular › Helix Hairpins › 0.53 34.0 3.77e-01 87.8% 86.0%
2bddA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.53 40.0 3.43e-01 83.8% 80.3%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.83e-01 100.0% 68.1%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 41.0 3.25e-01 87.8% 75.8%
2mc3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 46.0 4.16e-01 100.0% 73.8%
2ba0A03 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.52 40.0 3.88e-01 97.3% 74.7%
5dcaA11 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 45.0 3.99e-01 94.6% 85.7%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 40.0 4.14e-01 98.6% 89.7%
1yj7B01 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.51 34.0 3.50e-01 100.0% 73.2%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3941757 101.1.9.32 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › ANT 0.89 84.0 6.74e-01 100.0% 62.3%
3986225 101.1.9.32 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › ANT 0.88 82.0 5.78e-01 100.0% 39.5%
4942265 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 48.0 4.57e-01 75.7% 94.1%
5042411 101.1.2.150 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.65 53.0 5.09e-01 100.0% 76.5%
4642619 301.8.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS 0.63 46.0 3.63e-01 77.0% 81.3%
167429 101.1.2.15 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR 0.62 49.0 3.97e-01 100.0% 44.5%
3946321 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 42.0 4.45e-01 71.6% 92.3%
3281438 2005.1.1.95 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PF28097 0.60 53.0 3.54e-01 98.6% 44.7%
5019589 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 42.0 3.50e-01 74.3% 71.9%
5053763 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 43.0 4.05e-01 75.7% 81.1%
3282605 101.1.2.508 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25872 0.59 46.0 4.54e-01 100.0% 78.8%
3282985 101.1.2.508 ↗ alpha arrays › HTH › HTH › winged helix domain › PF25872 0.59 45.0 4.31e-01 97.3% 71.8%
3273469 101.1.2.281 ↗ alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.59 43.0 4.17e-01 77.0% 79.5%
3942501 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 52.0 4.86e-01 100.0% 85.6%
2388831 301.8.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS 0.58 39.0 3.39e-01 70.3% 81.7%
3380214 207.1.1.230 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › WHD_ROQ1 0.57 43.0 2.76e-01 82.4% 20.0%
3205602 101.1.2.281 ↗ alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.57 39.0 3.76e-01 73.0% 82.2%
3508627 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 40.0 4.15e-01 89.2% 80.0%
2816212 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.56 47.0 3.12e-01 97.3% 84.2%
4961047 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.56 44.0 4.24e-01 98.6% 75.3%
4927083 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 48.0 4.50e-01 100.0% 76.6%
3172537 301.8.1.1 ↗ a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS 0.55 42.0 3.20e-01 81.1% 81.0%
3287283 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 45.0 4.00e-01 100.0% 61.8%
4928989 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 47.0 4.43e-01 100.0% 78.5%
2725 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 45.0 4.46e-01 97.3% 85.2%
5006863 139.2.1.0 ↗ few secondary structure elements › Multiheme cytochromes › Di-heme elbow motif › Di-heme elbow motif 0.54 47.0 3.30e-01 100.0% 65.0%
4411000 139.2.1.6 ↗ few secondary structure elements › Multiheme cytochromes › Di-heme elbow motif › Di-heme elbow motif › Cytochrome_C554 0.54 47.0 3.44e-01 100.0% 58.1%
3261727 101.1.2.111 ↗ alpha arrays › HTH › HTH › winged helix domain › RQC 0.53 47.0 4.10e-01 98.6% 74.8%
4941351 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 43.0 4.16e-01 98.6% 77.6%
3979431 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.53 46.0 3.70e-01 100.0% 48.7%
4878879 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.53 46.0 4.15e-01 100.0% 72.4%
4968041 101.1.2.26 ↗ alpha arrays › HTH › HTH › winged helix domain › HxlR 0.53 43.0 3.52e-01 100.0% 46.9%
5077205 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 46.0 4.27e-01 100.0% 80.0%
3666925 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.52 46.0 3.92e-01 100.0% 61.6%
3428945 7581.1.1.25 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › FAE1_CUT1_RppA, ACP_syn_III_C 0.52 42.0 3.10e-01 91.9% 73.8%
5074000 101.1.2.30 ↗ alpha arrays › HTH › HTH › winged helix domain › TrmB 0.51 37.0 3.60e-01 89.2% 67.1%
3885544 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.51 37.0 3.98e-01 98.6% 98.3%
5024927 101.1.2.275 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF1495 0.51 44.0 3.99e-01 100.0% 74.3%
3305572 101.1.2.245 ↗ alpha arrays › HTH › HTH › winged helix domain › PORR 0.51 45.0 2.92e-01 100.0% 31.6%
5001357 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 45.0 4.10e-01 100.0% 82.0%
3587282 142.1.1.10 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › HTH_16 0.50 33.0 3.41e-01 82.4% 71.4%
3948634 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 44.0 4.06e-01 100.0% 78.9%
3445779 101.1.2.245 ↗ alpha arrays › HTH › HTH › winged helix domain › PORR 0.50 44.0 3.71e-01 98.6% 62.4%
4030596 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 39.0 3.78e-01 83.8% 75.3%