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OQ317942.1__WCS66561.1__0105phi72_015__00014

Bact-Vir

OQ317942.1__WCS66561.1__0105phi72_015__00014

Identity

Accession:
OQ317942 ↗
Kingdom:
phage

Quality

77.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Theosmithvirus› Bacillus_phage_0105phi7-2

TaxID: 3025408

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-91
PDB
Domain cluster: rep: KU517658.1__AMB17447.1__HMT_35__00035__D23-107
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12363.15 best Phage_TAC_12 45.7 1.10e-11 100.0% 86.5%
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xrhA00 1.20.120.1430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HP0721 helical bundle 0.62 37.0 3.61e-01 97.8% 53.0%
2vlaA01 1.10.10.2080 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.55 37.0 3.95e-01 81.1% 80.8%
4iejA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.55 34.0 3.68e-01 82.2% 74.7%
1cqxA01 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 42.0 3.65e-01 88.9% 91.3%
3v7dD01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.53 37.0 3.58e-01 72.2% 76.0%
6m36O01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.53 33.0 3.25e-01 94.4% 58.3%
1whuA00 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.51 35.0 3.37e-01 100.0% 61.5%
2pkeA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.51 38.0 4.05e-01 83.3% 94.9%
1u84A00 1.10.340.20 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain 0.50 37.0 3.92e-01 92.2% 87.7%
2x49A03 1.10.8.540 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › FHIPEP family, domain 3 0.50 35.0 3.58e-01 73.3% 77.8%
3i3tA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.50 44.0 3.10e-01 100.0% 85.5%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4990274 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.57 41.0 3.89e-01 91.1% 62.9%
3626977 3966.1.1.1 ↗ a+b complex topology › Mitoribosomal protein mS22 › Mitoribosomal protein mS22 › Mitoribosomal protein mS22 › MRP-S22 0.55 40.0 2.88e-01 77.8% 93.9%
3973977 601.3.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt 0.54 44.0 4.07e-01 93.3% 88.8%
4355585 101.1.1.304 ↗ alpha arrays › HTH › HTH › Three-helical HTH › GatB_Yqey 0.54 34.0 3.94e-01 77.8% 95.0%
4537543 3103.1.1.4 ↗ alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_9 0.54 47.0 4.28e-01 100.0% 89.6%
4954837 601.7.1.2 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN 0.53 43.0 3.73e-01 87.8% 90.0%
4951674 601.7.1.2 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN 0.52 40.0 3.58e-01 85.6% 76.4%
3421598 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.52 42.0 3.79e-01 87.8% 96.8%
3334694 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.52 42.0 4.38e-01 87.8% 100.0%
3311239 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.52 43.0 3.85e-01 90.0% 97.6%
3379716 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.52 42.0 3.82e-01 88.9% 97.6%
3997947 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.51 29.0 3.50e-01 90.0% 96.0%
3442297 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.51 41.0 4.30e-01 87.8% 96.4%
4652292 3254.1.1.1 ↗ alpha arrays › helical domain in flagellar biosynthesis protein flhA › helical domain in flagellar biosynthesis protein flhA › helical domain in flagellar biosynthesis protein flhA › FHIPEP 0.51 38.0 3.83e-01 77.8% 78.9%
1722503 101.1.2.129 ↗ alpha arrays › HTH › HTH › winged helix domain › BpuJI_N 0.51 41.0 3.65e-01 90.0% 60.9%
3650038 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.51 42.0 3.66e-01 88.9% 96.3%
3680460 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.51 42.0 4.41e-01 88.9% 100.0%
3312431 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.51 42.0 3.78e-01 90.0% 99.2%
3787144 101.1.1.8 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TEA 0.50 38.0 4.13e-01 83.3% 97.3%
D2 medium residues 139-241
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1st6A02 1.20.120.810 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vinculin, Vh2 four-helix bundle 0.69 49.0 3.75e-01 74.8% 54.7%
2lnlA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.54 41.0 2.99e-01 80.6% 50.7%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3896686 192.8.1.36 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › M_domain 0.59 40.0 4.14e-01 73.8% 73.0%
3697586 603.1.1.5 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N 0.58 41.0 3.45e-01 72.8% 52.9%
3231251 5001.1.1.27 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Sre 0.55 47.0 3.39e-01 97.1% 99.4%
4983349 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.54 39.0 2.69e-01 75.7% 65.2%