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OQ319121.1__WDS61270.1__SBM3_00191__00180
Bact-VirOQ319121.1__WDS61270.1__SBM3_00191__00180
Identity
- Accession:
- OQ319121 ↗
- Kingdom:
- phage
Quality
89.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Synechococcus_phage_S-BM3
TaxID: 753087
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-63
Domain cluster:
rep: OR515479.1__WNL63470.1__X__00194__D454-499
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02839.20 best | CBM_5_12 | 26.7 | 6.10e-06 | 86.5% | 70.5% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wx7A02 | 2.10.10.90 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.86 | 73.0 | 5.79e-01 | 94.2% | 49.5% |
| 1wvvB01 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.85 | 67.0 | 6.94e-01 | 96.2% | 91.7% |
| 1goiB03 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.81 | 65.0 | 6.61e-01 | 98.1% | 88.2% |
| 1ed7A00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.80 | 64.0 | 6.82e-01 | 92.3% | 100.0% |
| 1yueA02 | 2.10.10.40 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.75 | 65.0 | 6.24e-01 | 100.0% | 98.4% |
| 2rtsA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.73 | 66.0 | 5.83e-01 | 100.0% | 83.6% |
| 1aiwA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.68 | 60.0 | 5.62e-01 | 96.2% | 85.5% |
| 4n0qA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 48.0 | 3.50e-01 | 98.1% | 30.1% |
| 4maaA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 53.0 | 3.68e-01 | 100.0% | 30.0% |
| 1cb8A02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 47.0 | 3.20e-01 | 98.1% | 35.8% |
| 7ecrA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 46.0 | 3.36e-01 | 100.0% | 44.3% |
| 1iq8A04 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.56 | 45.0 | 4.11e-01 | 96.2% | 93.6% |
| 2d9uA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 34.0 | 3.03e-01 | 75.0% | 41.9% |
| 2nqwA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.56 | 40.0 | 3.44e-01 | 92.3% | 46.0% |
| 5tw4A02 | 2.30.140.20 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Penicillin-binding protein 4, C-terminal domain | 0.56 | 41.0 | 3.84e-01 | 82.7% | 94.2% |
| 1x9zA01 | 3.30.1540.20 | Alpha Beta › 2-Layer Sandwich › formyl-coa transferase, domain 3 › MutL, C-terminal domain, dimerisation subdomain | 0.55 | 45.0 | 3.81e-01 | 94.2% | 86.0% |
| 2q07A03 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.55 | 44.0 | 4.22e-01 | 96.2% | 95.5% |
| 2k6hA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.55 | 42.0 | 3.08e-01 | 90.4% | 92.9% |
| 4qucA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 32.0 | 3.21e-01 | 75.0% | 55.4% |
| 1xe1A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 42.0 | 3.68e-01 | 98.1% | 81.3% |
| 4lqeA00 | 3.40.1350.140 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › MepB-like | 0.52 | 41.0 | 3.17e-01 | 100.0% | 69.8% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.51 | 43.0 | 3.28e-01 | 100.0% | 42.4% |
| 4lgcA00 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.51 | 41.0 | 2.53e-01 | 100.0% | 68.4% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1322863 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.86 | 72.0 | 7.64e-01 | 92.3% | 100.0% |
| 1322862 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.85 | 72.0 | 7.51e-01 | 94.2% | 97.9% |
| 4110715 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.84 | 73.0 | 6.95e-01 | 96.2% | 81.4% |
| 5026481 | 64.3.1.3 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12_2 | 0.84 | 67.0 | 6.82e-01 | 98.1% | 88.0% |
| 3971347 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.83 | 74.0 | 7.13e-01 | 100.0% | 86.2% |
| 3972100 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.82 | 67.0 | 6.22e-01 | 98.1% | 70.8% |
| 4444075 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.81 | 63.0 | 6.81e-01 | 94.2% | 100.0% |
| 2389402 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.81 | 65.0 | 6.43e-01 | 98.1% | 83.3% |
| 1694867 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.78 | 71.0 | 7.09e-01 | 98.1% | 96.2% |
| 4009007 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.78 | 66.0 | 6.72e-01 | 98.1% | 96.0% |
| 4307941 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.78 | 67.0 | 6.42e-01 | 94.2% | 96.6% |
| 3981632 | 70.4.1.9 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_cement_2 | 0.76 | 51.0 | 5.63e-01 | 88.5% | 90.0% |
| 2966957 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.76 | 65.0 | 5.42e-01 | 98.1% | 64.1% |
| 4009008 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.75 | 64.0 | 6.31e-01 | 92.3% | 94.5% |
| 1002430 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.75 | 65.0 | 6.24e-01 | 100.0% | 98.4% |
| 3976685 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.73 | 66.0 | 6.53e-01 | 98.1% | 96.3% |
| 4177188 | 3312.1.1.0 ↗ | a+b two layers › Domain 2 in immunoglobulin A protease › Domain 2 in immunoglobulin A protease › Domain 2 in immunoglobulin A protease | 0.73 | 65.0 | 5.73e-01 | 100.0% | 69.3% |
| 4233290 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.73 | 62.0 | 6.32e-01 | 100.0% | 98.0% |
| 1291025 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.73 | 66.0 | 5.83e-01 | 100.0% | 83.6% |
| 3412645 | 64.3.1.4 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › Tmp39 | 0.71 | 53.0 | 4.76e-01 | 80.8% | 58.6% |
| 4149799 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.69 | 58.0 | 5.89e-01 | 92.3% | 98.0% |
| 5039450 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.68 | 54.0 | 4.79e-01 | 92.3% | 61.3% |
| 4887092 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.68 | 60.0 | 5.13e-01 | 100.0% | 63.1% |
| 4009012 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.68 | 60.0 | 5.62e-01 | 100.0% | 81.2% |
| 5022946 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.67 | 53.0 | 4.65e-01 | 92.3% | 57.5% |
| 5009746 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.67 | 53.0 | 4.74e-01 | 92.3% | 61.3% |
| 4945977 | 1143.1.1.0 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit | 0.67 | 52.0 | 4.60e-01 | 92.3% | 57.5% |
| 2736862 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.67 | 56.0 | 5.21e-01 | 100.0% | 80.9% |
| 4983644 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.66 | 52.0 | 4.58e-01 | 92.3% | 57.5% |
| 3999975 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.66 | 51.0 | 4.63e-01 | 92.3% | 61.3% |
| 4962194 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.65 | 50.0 | 4.64e-01 | 92.3% | 65.7% |
| 4168203 | 1143.1.1.1 ↗ | beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.64 | 50.0 | 4.42e-01 | 92.3% | 57.5% |
| 2736861 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.62 | 52.0 | 4.83e-01 | 98.1% | 74.6% |
| 4996605 | 70.3.1.12 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › PF30644 | 0.61 | 48.0 | 4.13e-01 | 84.6% | 76.2% |
| 5037365 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.60 | 43.0 | 2.95e-01 | 88.5% | 18.7% |
| 4937314 | 520.2.1.0 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE | 0.59 | 46.0 | 4.18e-01 | 90.4% | 93.3% |
| 2429140 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 42.0 | 2.59e-01 | 80.8% | 27.4% |
| 3558025 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 41.0 | 2.56e-01 | 80.8% | 28.5% |
| 3619978 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 40.0 | 2.48e-01 | 80.8% | 27.2% |
| 3801967 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.55 | 43.0 | 2.84e-01 | 100.0% | 29.7% |
| 3607877 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.53 | 37.0 | 2.66e-01 | 100.0% | 22.2% |
| 3940712 | 5.1.4.223 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd | 0.52 | 37.0 | 2.09e-01 | 80.8% | 42.5% |
| 3826283 | 207.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 | 0.51 | 40.0 | 2.77e-01 | 100.0% | 32.2% |
| 3687155 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.51 | 38.0 | 2.94e-01 | 86.5% | 84.8% |
D2
medium
residues 69-112
Domain cluster:
rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00278__D14-57
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wx7A02 | 2.10.10.90 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.93 | 84.0 | 6.36e-01 | 97.7% | 49.5% |
| 1ed7A00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.83 | 70.0 | 6.97e-01 | 95.5% | 100.0% |
| 1wvvB01 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.82 | 72.0 | 7.08e-01 | 100.0% | 91.7% |
| 1goiB03 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.81 | 72.0 | 6.84e-01 | 100.0% | 86.3% |
| 2rtsA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.80 | 70.0 | 5.93e-01 | 100.0% | 80.8% |
| 1yueA02 | 2.10.10.40 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.78 | 68.0 | 6.11e-01 | 100.0% | 95.1% |
| 1aiwA00 | 2.10.10.20 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › Carbohydrate-binding module superfamily 5/12 | 0.76 | 67.0 | 6.01e-01 | 100.0% | 85.5% |
| 4tkoB02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.69 | 54.0 | 4.74e-01 | 86.4% | 75.8% |
| 3k3sH01 | 2.30.130.110 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › | 0.69 | 56.0 | 4.69e-01 | 95.5% | 91.5% |
| 3prbA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.67 | 52.0 | 5.26e-01 | 88.6% | 84.1% |
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 45.0 | 4.15e-01 | 79.5% | 58.3% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 54.0 | 4.81e-01 | 97.7% | 71.4% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 54.0 | 4.85e-01 | 97.7% | 71.0% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 53.0 | 4.71e-01 | 100.0% | 71.2% |
| 4wsqB00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.60 | 44.0 | 2.64e-01 | 79.5% | 11.3% |
| 1xm8A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.58 | 48.0 | 2.99e-01 | 93.2% | 29.5% |
| 1n27A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 44.0 | 3.48e-01 | 84.1% | 81.2% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 40.0 | 2.99e-01 | 75.0% | 36.1% |
| 4amcA01 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.57 | 41.0 | 4.08e-01 | 84.1% | 73.9% |
| 2o3gA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.57 | 44.0 | 3.80e-01 | 95.5% | 52.6% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.57 | 48.0 | 3.30e-01 | 97.7% | 30.5% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 47.0 | 4.23e-01 | 100.0% | 67.7% |
| 2dyiA02 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.56 | 39.0 | 3.38e-01 | 75.0% | 46.5% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 47.0 | 4.15e-01 | 100.0% | 69.6% |
| 2oaiA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.56 | 43.0 | 3.69e-01 | 93.2% | 50.0% |
| 2nqwA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.55 | 43.0 | 3.59e-01 | 95.5% | 46.0% |
| 2d9uA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 37.0 | 3.13e-01 | 75.0% | 43.2% |
| 2vhlA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.53 | 43.0 | 2.62e-01 | 90.9% | 82.1% |
| 4le7A02 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.53 | 39.0 | 3.37e-01 | 86.4% | 86.6% |
| 2j8gA02 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.53 | 42.0 | 3.51e-01 | 90.9% | 75.6% |
| 2qggA02 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.53 | 41.0 | 3.40e-01 | 88.6% | 60.2% |
| 4npsA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 36.0 | 3.40e-01 | 75.0% | 100.0% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1322863 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.94 | 83.0 | 8.24e-01 | 95.5% | 100.0% |
| 4110715 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.92 | 83.0 | 7.41e-01 | 97.7% | 79.7% |
| 1322862 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.91 | 82.0 | 7.96e-01 | 97.7% | 97.9% |
| 3971347 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.90 | 83.0 | 7.48e-01 | 100.0% | 82.8% |
| 1694867 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.88 | 81.0 | 7.53e-01 | 100.0% | 94.3% |
| 3972100 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.85 | 76.0 | 6.62e-01 | 100.0% | 69.2% |
| 4026053 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.84 | 65.0 | 6.78e-01 | 84.1% | 92.5% |
| 4307941 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.83 | 73.0 | 6.59e-01 | 97.7% | 96.6% |
| 5026481 | 64.3.1.3 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12_2 | 0.83 | 73.0 | 7.02e-01 | 100.0% | 86.0% |
| 4009007 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.83 | 74.0 | 7.08e-01 | 100.0% | 94.0% |
| 2389402 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.81 | 71.0 | 6.69e-01 | 100.0% | 81.5% |
| 4444075 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.80 | 70.0 | 7.13e-01 | 97.7% | 100.0% |
| 4009008 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.80 | 68.0 | 6.34e-01 | 95.5% | 94.5% |
| 3976685 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.80 | 71.0 | 6.68e-01 | 100.0% | 96.3% |
| 1291025 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.80 | 70.0 | 5.93e-01 | 100.0% | 80.8% |
| 4233290 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.79 | 70.0 | 6.73e-01 | 100.0% | 94.0% |
| 3981632 | 70.4.1.9 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_cement_2 | 0.78 | 59.0 | 6.17e-01 | 90.9% | 90.0% |
| 3999193 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.77 | 52.0 | 4.47e-01 | 93.2% | 45.6% |
| 3992248 | 391.1.2.9 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 | 0.75 | 54.0 | 5.26e-01 | 90.9% | 69.4% |
| 4009012 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.73 | 62.0 | 5.59e-01 | 100.0% | 78.1% |
| 4020598 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.73 | 55.0 | 3.10e-01 | 100.0% | 7.5% |
| 3508453 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.73 | 53.0 | 5.71e-01 | 90.9% | 97.1% |
| 4149799 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.72 | 59.0 | 5.77e-01 | 95.5% | 98.0% |
| 3899335 | 356.1.1.2 ↗ | few secondary structure elements › PMP inhibitors › PMP inhibitors › PMP inhibitors › VWF | 0.71 | 46.0 | 4.94e-01 | 88.6% | 82.9% |
| 3524959 | 391.1.1.8 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › VWF | 0.71 | 46.0 | 4.92e-01 | 88.6% | 82.9% |
| 3519728 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.70 | 53.0 | 4.94e-01 | 93.2% | 65.5% |
| 4956395 | 239.1.1.7 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH | 0.69 | 57.0 | 5.31e-01 | 93.2% | 72.7% |
| 4996605 | 70.3.1.12 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › PF30644 | 0.69 | 57.0 | 4.79e-01 | 97.7% | 95.0% |
| 5015989 | 239.1.1.7 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH | 0.68 | 55.0 | 5.14e-01 | 93.2% | 70.9% |
| 4962605 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.68 | 55.0 | 4.31e-01 | 90.9% | 64.2% |
| 4950806 | 4.6.1.8 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › WH_Lhr | 0.68 | 55.0 | 5.09e-01 | 93.2% | 70.9% |
| 2736862 | 64.3.1.0 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain | 0.68 | 55.0 | 4.96e-01 | 100.0% | 77.9% |
| 2736861 | 64.3.1.1 ↗ | beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain › CBM_5_12 | 0.67 | 55.0 | 4.94e-01 | 100.0% | 74.6% |
| 4306304 | 391.1.2.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC | 0.66 | 45.0 | 4.14e-01 | 90.9% | 51.7% |
| 4169889 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.66 | 55.0 | 4.72e-01 | 93.2% | 71.4% |
| 4959950 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.66 | 53.0 | 4.30e-01 | 90.9% | 64.7% |
| 4146937 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.63 | 54.0 | 4.81e-01 | 97.7% | 69.2% |
| 3512480 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.63 | 45.0 | 4.64e-01 | 90.9% | 85.0% |
| 5022325 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.63 | 50.0 | 3.88e-01 | 88.6% | 54.0% |
| 3502375 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.63 | 50.0 | 5.04e-01 | 86.4% | 91.1% |
| 3773541 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.62 | 51.0 | 3.04e-01 | 95.5% | 12.3% |
| 4419948 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.61 | 54.0 | 4.77e-01 | 100.0% | 72.3% |
| 3558025 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.61 | 50.0 | 2.99e-01 | 95.5% | 12.1% |
| 5004050 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 47.0 | 4.05e-01 | 84.1% | 55.7% |
| 4966144 | 3454.1.1.9 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like › PF26687 | 0.60 | 50.0 | 4.33e-01 | 93.2% | 80.0% |
| 5018537 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.59 | 40.0 | 3.24e-01 | 75.0% | 94.0% |
| 3619978 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 45.0 | 2.68e-01 | 93.2% | 11.3% |
| 3469035 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.57 | 39.0 | 3.49e-01 | 77.3% | 51.7% |
| 5794 | 295.1.1.7 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › MRP | 0.57 | 48.0 | 3.30e-01 | 97.7% | 30.5% |
| 3639839 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.57 | 38.0 | 3.60e-01 | 75.0% | 58.5% |
| 3198780 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.55 | 37.0 | 3.19e-01 | 77.3% | 45.6% |
| 3333339 | 4.8.1.34 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_SEND1 | 0.54 | 37.0 | 3.27e-01 | 75.0% | 49.2% |
| 3164938 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.53 | 42.0 | 2.67e-01 | 93.2% | 30.2% |
| 3964086 | 4056.1.1.10 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › ResB | 0.53 | 42.0 | 3.20e-01 | 93.2% | 46.1% |
| 3470007 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.52 | 36.0 | 3.16e-01 | 77.3% | 47.7% |