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OQ319121.1__WDS61278.1__SBM3_00199__00188

Bact-Vir

OQ319121.1__WDS61278.1__SBM3_00199__00188

Identity

Accession:
OQ319121 ↗
Kingdom:
phage

Quality

76.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Synechococcus_phage_S-BM3

TaxID: 753087

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-80
PDB
Domain cluster: rep: RifSed_csp2_10ft_3_scaffold_6_prodigal-single.1__X__X__00468__D116-186
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4l3aA03 2.60.40.3890 Mainly Beta › Sandwich › Immunoglobulin-like › 0.74 67.0 5.52e-01 100.0% 84.8%
2zuvA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.73 64.0 5.45e-01 100.0% 72.6%
4igbB02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.69 61.0 4.72e-01 100.0% 55.9%
3hr6A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.68 59.0 4.52e-01 100.0% 55.4%
4wz9A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.68 58.0 4.11e-01 100.0% 34.6%
2x9zA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 59.0 4.55e-01 100.0% 53.7%
1r17A02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 55.0 4.29e-01 100.0% 59.5%
3kptA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 57.0 4.46e-01 100.0% 53.2%
4a0tA03 2.60.320.30 Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › 0.65 55.0 5.04e-01 100.0% 87.8%
8dhaA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 52.0 4.80e-01 92.2% 87.4%
2qtsA02 2.60.470.10 Mainly Beta › Sandwich › Acid-sensing ion channels like fold › Acid-sensing ion channels like domains 0.64 52.0 3.84e-01 92.2% 39.3%
1i1rA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 55.0 4.78e-01 100.0% 78.0%
3l4yA05 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 53.0 4.23e-01 100.0% 55.8%
7o0eA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 51.0 4.75e-01 100.0% 72.3%
4fgmA01 2.60.40.3650 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 53.0 3.93e-01 100.0% 39.0%
2w59B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 53.0 4.42e-01 100.0% 77.2%
3o4oC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 52.0 4.42e-01 98.4% 69.2%
5fm5P00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 51.0 4.53e-01 100.0% 78.6%
1ryjA00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.60 48.0 4.66e-01 100.0% 80.0%
1bihA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 51.0 4.55e-01 100.0% 75.3%
3jqwC00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.59 51.0 4.24e-01 100.0% 73.6%
2f0cA02 2.60.40.1830 Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain 0.59 50.0 4.40e-01 100.0% 67.3%
4v2bA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 50.0 4.35e-01 100.0% 78.3%
8ediA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 50.0 4.38e-01 100.0% 79.8%
4ei0A01 2.60.40.3550 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 0.58 49.0 3.94e-01 100.0% 55.3%
1rgxA02 2.60.40.4230 Mainly Beta › Sandwich › Immunoglobulin-like › Resistin head domain 0.58 44.0 4.45e-01 100.0% 84.4%
5k6uA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 50.0 4.53e-01 100.0% 80.0%
1rhfA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 47.0 4.33e-01 96.9% 79.1%
1wckA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.57 50.0 3.96e-01 100.0% 90.4%
6c98A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 47.0 4.30e-01 98.4% 80.2%
5f7uA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 48.0 4.10e-01 100.0% 86.5%
1bvp102 2.60.120.170 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 3.90e-01 100.0% 67.7%
4ofkB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 47.0 4.14e-01 100.0% 76.9%
5i99A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 47.0 4.23e-01 100.0% 77.9%
5o5iA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 47.0 4.25e-01 100.0% 78.3%
3vi3B02 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.55 44.0 3.46e-01 100.0% 39.6%
8ediA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 46.0 4.21e-01 100.0% 78.0%
2luwA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.54 47.0 4.11e-01 100.0% 64.4%
4k35A02 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.54 46.0 3.32e-01 100.0% 42.6%
2e7cA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 45.0 4.01e-01 100.0% 76.0%
5vt8C01 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.54 44.0 3.95e-01 100.0% 82.2%
3ubfA03 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.53 44.0 3.95e-01 100.0% 71.6%
4u7mA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 45.0 4.07e-01 100.0% 76.6%
4xhzA02 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.53 44.0 3.88e-01 100.0% 84.1%
3r4dA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 4.03e-01 100.0% 77.2%
5iryA01 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.53 44.0 4.02e-01 100.0% 94.7%
6bxzA02 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.53 44.0 3.91e-01 100.0% 74.3%
1wghA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.53 44.0 4.13e-01 98.4% 92.8%
1t7vA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 43.0 3.99e-01 100.0% 87.8%
3abzA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 44.0 3.38e-01 100.0% 43.6%
6qe7A01 3.90.182.10 Alpha Beta › Alpha-Beta Complex › Toxin - Anthrax Protective Antigen; domain 1 › Toxin - Anthrax Protective Antigen;domain 1 0.51 45.0 3.52e-01 100.0% 46.3%
4wiqA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 42.0 3.73e-01 100.0% 67.9%
7sz8A01 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.51 42.0 3.81e-01 100.0% 87.9%
1nlqE00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.51 44.0 3.88e-01 100.0% 71.4%
1edhA01 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.51 41.0 3.73e-01 100.0% 76.8%
5cyxA01 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.51 43.0 4.03e-01 100.0% 90.2%
3t30C00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.50 43.0 3.84e-01 100.0% 76.8%
1xe0C00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.50 42.0 3.75e-01 100.0% 93.1%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3604177 3386.2.1.0 ↗ beta sandwiches › gp9 C-terminal domain-like › gp10 domain 2 and domain 3 › gp10 domain 2 and domain 3 0.82 74.0 7.23e-01 100.0% 97.1%
3580349 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.81 73.0 6.40e-01 100.0% 87.4%
3197931 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.76 67.0 5.28e-01 100.0% 60.7%
5012858 11.1.1.33 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin 0.76 69.0 5.32e-01 100.0% 69.6%
4225090 2002.1.1.160 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Lact_bio_phlase 0.75 66.0 3.97e-01 100.0% 17.7%
4942095 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.74 60.0 5.87e-01 89.1% 92.9%
3190669 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.74 65.0 5.15e-01 100.0% 60.4%
1097258 11.1.1.342 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › InlK_D2 0.74 67.0 5.25e-01 100.0% 69.2%
1837850 2002.1.1.160 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Lact_bio_phlase 0.74 64.0 3.89e-01 100.0% 17.3%
3253275 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.73 66.0 5.97e-01 100.0% 80.0%
3258281 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.72 66.0 5.44e-01 100.0% 59.1%
3272130 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.72 64.0 5.99e-01 100.0% 87.5%
4944859 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.72 62.0 5.18e-01 98.4% 74.8%
3512122 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.71 63.0 4.51e-01 100.0% 35.7%
3924218 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.71 63.0 5.18e-01 100.0% 58.3%
3270576 11.1.1.29 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.70 62.0 5.79e-01 100.0% 85.0%
5050654 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.70 61.0 4.56e-01 100.0% 55.2%
3251200 11.1.1.698 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TgrO1 0.70 61.0 5.62e-01 100.0% 81.2%
4955177 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.69 60.0 5.17e-01 100.0% 67.6%
3258967 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 61.0 5.70e-01 100.0% 87.5%
3249577 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 61.0 5.82e-01 100.0% 88.0%
3259324 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 59.0 5.45e-01 100.0% 80.0%
1236190 11.1.5.45 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › GramPos_pilinBB 0.67 59.0 4.50e-01 100.0% 52.6%
3504734 4178.1.1.0 ↗ beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain 0.67 57.0 4.53e-01 96.9% 54.8%
4928543 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.66 58.0 5.16e-01 100.0% 76.8%
3920856 4178.1.1.0 ↗ beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain 0.65 55.0 4.26e-01 95.3% 53.1%
3194521 4178.1.1.0 ↗ beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain 0.65 57.0 4.40e-01 98.4% 59.7%
1178821 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.65 57.0 4.46e-01 100.0% 53.2%
3204197 4178.1.1.0 ↗ beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain 0.64 55.0 4.38e-01 96.9% 59.0%
3401434 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 54.0 4.89e-01 100.0% 76.8%
141846 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.63 55.0 3.89e-01 100.0% 33.5%
5040224 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 56.0 4.92e-01 100.0% 81.1%
3557833 11.1.1.86 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Lep_receptor_Ig 0.63 53.0 4.77e-01 98.4% 82.1%
5010042 12.5.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.63 54.0 4.20e-01 100.0% 48.0%
3923826 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 51.0 4.60e-01 98.4% 78.9%
3580672 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.60 51.0 4.15e-01 100.0% 54.8%
3973332 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 52.0 4.97e-01 100.0% 89.3%
3188281 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 50.0 4.04e-01 100.0% 47.9%
3917973 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.60 50.0 4.48e-01 98.4% 81.1%
3575562 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.59 51.0 4.48e-01 100.0% 75.0%
3514254 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.59 51.0 4.47e-01 100.0% 70.0%
3237923 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.59 49.0 4.41e-01 96.9% 70.5%
3581731 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.59 50.0 4.30e-01 100.0% 67.3%
3894301 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.58 49.0 4.56e-01 93.8% 78.8%
3486454 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 50.0 4.29e-01 98.4% 76.2%
4944855 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.58 49.0 4.50e-01 100.0% 91.1%
3792999 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.58 50.0 3.77e-01 100.0% 46.1%
3503687 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.57 49.0 4.40e-01 100.0% 76.8%
3923724 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 49.0 4.34e-01 98.4% 78.9%
3885242 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.57 49.0 4.31e-01 100.0% 75.0%
3254463 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 48.0 4.42e-01 100.0% 81.1%
3780874 12.5.1.2 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › GPS 0.57 47.0 3.44e-01 100.0% 42.0%
4550624 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.57 48.0 4.28e-01 98.4% 78.9%
3574277 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.56 48.0 4.43e-01 100.0% 88.2%
4412634 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 44.0 3.61e-01 100.0% 43.8%
3508267 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.56 48.0 4.23e-01 100.0% 72.0%
4004219 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.56 48.0 3.96e-01 100.0% 56.0%
3971760 1.1.7.80 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RND-MFP_C 0.56 47.0 4.45e-01 100.0% 87.5%
3217171 11.1.1.178 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 0.56 48.0 4.14e-01 100.0% 71.4%
3847830 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.56 48.0 4.34e-01 100.0% 78.9%
3582793 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.56 47.0 4.31e-01 100.0% 80.0%
3229965 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 47.0 3.87e-01 98.4% 58.4%
3532050 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.55 47.0 4.04e-01 100.0% 80.0%
3578513 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.55 46.0 4.18e-01 100.0% 76.8%
3873647 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.55 46.0 4.06e-01 100.0% 73.3%
3932168 10.1.1.10 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.55 47.0 3.56e-01 100.0% 64.1%
None — 0.55 46.0 2.84e-01 100.0% 16.0%
3912331 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.54 46.0 4.18e-01 100.0% 82.2%
2996565 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.54 44.0 3.98e-01 100.0% 66.7%
3880210 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.54 43.0 4.04e-01 90.6% 76.2%
3892523 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.53 45.0 4.08e-01 100.0% 77.9%
3531641 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.53 45.0 3.75e-01 100.0% 60.8%
3245062 11.1.1.178 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 0.53 44.0 4.13e-01 100.0% 83.5%
3902624 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.53 45.0 4.05e-01 100.0% 74.7%
3921078 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.52 44.0 4.03e-01 100.0% 78.9%
D2 high residues 647-767
PDB
Domain cluster: rep: GU936714.1__ADF42387.1__S-CBS2_gp031__00031__D564-679
D3 medium residues 437-507
PDB
Domain cluster: rep: NC_062735.1__YP_010355475.1__M1M13_gp086__00086__D641-721
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4b3fX02 2.40.30.270 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.71 64.0 5.75e-01 100.0% 83.7%
1fx0B01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.68 60.0 5.85e-01 100.0% 92.4%
2nv4A00 2.40.30.70 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like 0.68 59.0 4.82e-01 97.2% 88.6%
6tdyD01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.68 59.0 5.84e-01 100.0% 94.7%
1v0fB03 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.67 57.0 5.49e-01 100.0% 92.9%
4zgnB00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.66 55.0 4.85e-01 91.5% 75.7%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.66 58.0 5.22e-01 100.0% 93.0%
4g6iB01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.65 57.0 5.34e-01 100.0% 88.8%
3qtgA02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.64 56.0 5.17e-01 100.0% 89.4%
1nxzA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.64 50.0 4.98e-01 84.5% 91.7%
8eq1A01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.63 54.0 5.08e-01 98.6% 100.0%
5tr9A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.63 54.0 4.98e-01 100.0% 92.7%
2dpyA00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 54.0 3.36e-01 100.0% 16.6%
3okxB00 2.40.30.70 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like 0.62 52.0 4.25e-01 100.0% 77.9%
7r6yA01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.61 53.0 4.90e-01 98.6% 100.0%
4kbxA01 2.40.37.30 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › 0.60 53.0 3.74e-01 100.0% 31.0%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.60 51.0 4.99e-01 100.0% 97.5%
3tfiA00 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.60 48.0 3.08e-01 90.1% 17.3%
4bi3A01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.59 43.0 4.02e-01 100.0% 61.5%
4aq1A01 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 49.0 4.54e-01 100.0% 72.3%
4j3cA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.59 44.0 4.60e-01 83.1% 93.8%
6ijfC01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.59 42.0 3.91e-01 100.0% 59.1%
4lusB01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.59 50.0 4.03e-01 100.0% 58.4%
6hhuA01 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 49.0 4.76e-01 95.8% 85.9%
4v15A01 2.40.37.20 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › D-serine dehydratase-like domain 0.58 48.0 3.94e-01 100.0% 47.9%
1r8nA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.58 41.0 3.19e-01 78.9% 93.5%
2ra1A04 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 49.0 4.50e-01 98.6% 77.3%
2vrsA03 2.60.90.40 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.55 46.0 3.92e-01 100.0% 72.7%
1x31A02 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.55 42.0 2.71e-01 87.3% 56.8%
2ylkA00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.54 46.0 3.78e-01 100.0% 55.9%
4k22A02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.54 43.0 3.82e-01 90.1% 63.9%
3zpeA00 2.60.90.50 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.54 43.0 3.71e-01 100.0% 69.6%
3l4rA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 38.0 3.04e-01 76.1% 73.5%
3ttgA00 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.53 45.0 2.95e-01 97.2% 95.5%
2zxqA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 41.0 3.21e-01 100.0% 35.8%
5h4cB00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.53 44.0 3.72e-01 100.0% 89.6%
7uwjC02 2.60.40.2150 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 0.52 44.0 4.08e-01 100.0% 77.3%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.52 42.0 4.30e-01 100.0% 94.0%
4zelB01 2.60.120.310 Mainly Beta › Sandwich › Jelly Rolls › Copper type II, ascorbate-dependent monooxygenase, N-terminal domain 0.52 44.0 3.61e-01 100.0% 86.8%
3ecqA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 41.0 2.91e-01 93.0% 85.4%
5axgA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 42.0 3.65e-01 100.0% 72.2%
1whoA00 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.51 43.0 3.99e-01 100.0% 96.8%
1tdqA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 42.0 3.96e-01 100.0% 80.0%
1wzlA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 42.0 3.66e-01 100.0% 68.6%
1o91A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.50 42.0 3.57e-01 100.0% 87.8%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3969204 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.82 72.0 7.08e-01 100.0% 89.3%
1714447 11.21.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.77 71.0 5.68e-01 100.0% 62.1%
4026674 11.21.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.77 71.0 6.78e-01 100.0% 88.7%
4027218 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.77 70.0 6.72e-01 100.0% 87.5%
3973332 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.76 64.0 6.29e-01 100.0% 86.7%
3944437 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.75 69.0 6.63e-01 100.0% 90.0%
3198544 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.74 67.0 5.69e-01 100.0% 90.4%
3172227 7558.1.1.0 ↗ a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase 0.73 66.0 6.01e-01 100.0% 91.6%
3712506 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.73 66.0 6.22e-01 100.0% 83.5%
3180314 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.72 65.0 6.16e-01 100.0% 94.1%
3575535 1.1.7.113 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11, AAA_12 0.72 64.0 3.88e-01 100.0% 18.9%
5079674 11.21.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.71 62.0 6.16e-01 100.0% 93.3%
3387360 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 59.0 5.62e-01 100.0% 78.8%
3596642 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 61.0 5.73e-01 100.0% 82.4%
3512272 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 59.0 5.88e-01 100.0% 92.0%
4162532 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.68 57.0 5.61e-01 100.0% 88.0%
4518787 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.68 59.0 5.82e-01 100.0% 93.3%
4854964 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.68 60.0 5.65e-01 100.0% 83.7%
4636885 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.67 59.0 5.83e-01 100.0% 94.7%
2556060 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.67 59.0 5.74e-01 100.0% 91.0%
1030933 1.1.7.29 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › End_beta_barrel 0.67 59.0 5.53e-01 100.0% 88.8%
1790393 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 57.0 5.45e-01 100.0% 82.9%
4429352 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 58.0 5.35e-01 100.0% 76.7%
4943639 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 57.0 5.43e-01 100.0% 85.9%
3247984 11.21.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.66 56.0 5.40e-01 95.8% 98.8%
3739461 1.1.7.4 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 0.66 57.0 3.63e-01 100.0% 27.6%
3613937 1.1.7.13 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › TrmO 0.65 55.0 4.41e-01 98.6% 78.6%
4066625 1.1.7.9 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.64 54.0 4.59e-01 100.0% 70.8%
3953578 1.1.7.9 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.64 56.0 4.62e-01 100.0% 73.8%
4228874 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.63 49.0 4.90e-01 90.1% 82.7%
3332717 1.1.15.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.62 53.0 4.76e-01 98.6% 85.7%
4152684 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.61 47.0 4.66e-01 88.7% 79.5%
4080655 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.61 48.0 4.45e-01 90.1% 73.7%
5015359 1.1.15.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.60 51.0 4.92e-01 100.0% 89.4%
5023371 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 52.0 4.79e-01 100.0% 87.4%
5036802 205.1.1.1 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.59 49.0 4.06e-01 95.8% 52.9%
4567650 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.59 47.0 4.13e-01 91.5% 60.9%
1069946 219.1.1.52 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Tae4 0.59 43.0 3.36e-01 100.0% 34.4%
3887475 12.5.1.15 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › FAM171A1-2-B_N 0.59 50.0 3.90e-01 100.0% 50.0%
4337472 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.58 47.0 4.35e-01 93.0% 76.8%
3525543 11.1.1.991 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28112 0.58 51.0 4.44e-01 100.0% 69.1%
3221619 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 47.0 4.34e-01 100.0% 69.0%
1487334 5092.1.1.7 ↗ beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Fibre_HD 0.57 48.0 4.16e-01 100.0% 59.5%
4932909 2.21.1.0 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.55 39.0 3.30e-01 76.1% 96.3%
5069645 613.1.1.1 ↗ alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › tRNA-synt_2c 0.55 47.0 3.10e-01 100.0% 21.2%
4960956 12.5.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.55 46.0 3.68e-01 100.0% 49.4%
3264433 11.1.1.843 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 0.53 45.0 3.86e-01 94.4% 84.3%
2121133 304.107.1.1 ↗ a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T 0.53 41.0 2.92e-01 88.7% 86.5%
3214125 304.107.1.1 ↗ a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T 0.53 42.0 3.14e-01 88.7% 88.9%
3701728 304.107.1.1 ↗ a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T 0.52 41.0 2.83e-01 88.7% 77.1%
3965729 1.1.7.80 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RND-MFP_C 0.52 42.0 4.07e-01 93.0% 78.8%
4150515 11.2.1.44 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_SHIP1-2_2nd 0.52 41.0 3.36e-01 90.1% 73.1%
3254455 11.1.1.843 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 0.52 44.0 3.43e-01 97.2% 57.0%
5062710 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.52 40.0 3.68e-01 88.7% 66.0%
3242220 11.2.1.17 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › NT-C2 0.51 41.0 3.19e-01 90.1% 72.7%
4498731 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 43.0 3.55e-01 100.0% 96.4%
3672841 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 43.0 2.79e-01 97.2% 44.1%
3580256 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 42.0 3.91e-01 100.0% 72.6%
1558582 5092.1.1.6 ↗ beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Fiber_head_BAdV-4 0.50 42.0 3.70e-01 100.0% 67.0%
D4 medium residues 516-551
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.65 52.0 4.21e-01 100.0% 58.7%
3zleA03 2.10.70.70 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.65 46.0 4.54e-01 86.1% 71.8%
1golA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 52.0 3.72e-01 100.0% 63.3%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.63 51.0 3.90e-01 100.0% 49.0%
3fxzA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 51.0 3.91e-01 100.0% 76.5%
6heiA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.63 54.0 3.15e-01 100.0% 11.4%
2gfoA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.63 52.0 3.05e-01 100.0% 11.2%
6muwB00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.63 49.0 3.13e-01 100.0% 37.6%
3uiuA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 50.0 3.87e-01 100.0% 84.5%
1ekgA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.62 49.0 3.61e-01 100.0% 31.1%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.61 47.0 3.61e-01 100.0% 33.3%
1jssA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 47.0 3.08e-01 100.0% 32.7%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.59 48.0 3.75e-01 100.0% 49.4%
8f66A01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.59 44.0 2.93e-01 100.0% 41.9%
1iruI00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.59 43.0 2.85e-01 100.0% 37.7%
5chtB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.58 50.0 2.97e-01 100.0% 12.7%
3d8dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 49.0 3.34e-01 100.0% 59.0%
6jhpA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.57 44.0 2.72e-01 100.0% 56.2%
1aisA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.56 46.0 3.63e-01 100.0% 39.1%
6eufA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 48.0 2.85e-01 100.0% 14.0%
1qnaA01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.56 45.0 3.48e-01 100.0% 36.6%
1uyjA01 3.30.360.60 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › 0.55 39.0 3.21e-01 86.1% 35.4%
4mnkA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.55 38.0 3.28e-01 75.0% 84.6%
1cdwA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.55 42.0 3.38e-01 100.0% 39.5%
1tluA00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.54 44.0 3.20e-01 100.0% 65.8%
3alfA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.54 37.0 3.09e-01 72.2% 84.3%
3f3zA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 42.0 3.47e-01 100.0% 92.7%
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 38.0 2.22e-01 83.3% 7.1%
1hczA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 39.0 3.49e-01 86.1% 78.0%
6z46V01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.51 37.0 2.54e-01 97.2% 46.2%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2526334 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.69 51.0 3.23e-01 83.3% 55.5%
4132528 4041.1.1.0 ↗ a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase 0.69 55.0 3.55e-01 100.0% 17.9%
3601907 5.1.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed 0.66 54.0 3.41e-01 100.0% 16.8%
4945506 210.1.1.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.64 51.0 3.29e-01 100.0% 40.0%
5037179 236.3.1.1 ↗ beta barrels › GroES-like › AF1531-like › AF1531-like › DUF655 0.64 49.0 4.35e-01 100.0% 93.8%
None — 0.62 54.0 3.03e-01 100.0% 8.4%
4795566 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.62 55.0 4.50e-01 100.0% 56.7%
3515019 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.61 53.0 3.14e-01 100.0% 13.3%
5045075 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.61 47.0 3.10e-01 83.3% 20.7%
3586192 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.60 42.0 3.35e-01 88.9% 36.0%
4100130 210.1.1.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.59 43.0 2.84e-01 100.0% 36.0%
4556297 210.1.1.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.58 43.0 2.91e-01 100.0% 42.4%
3718316 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.58 46.0 2.71e-01 100.0% 32.8%
3924601 5.1.5.18 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Vps16_N 0.58 43.0 2.62e-01 100.0% 14.2%
3628410 12.1.1.23 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › hGDE_central 0.57 45.0 3.37e-01 100.0% 95.5%
4980908 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.56 44.0 2.91e-01 86.1% 20.0%
4961658 4018.1.1.2 ↗ a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.56 44.0 3.20e-01 100.0% 27.7%
None — 0.56 42.0 2.46e-01 100.0% 16.9%
3741401 239.3.1.1 ↗ beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin 0.55 41.0 2.88e-01 100.0% 23.7%
3226023 3156.1.1.9 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_3 0.54 43.0 2.76e-01 97.2% 21.0%
3944566 809.1.1.10 ↗ a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › EndoU_bacteria 0.53 42.0 3.70e-01 100.0% 58.3%
3391086 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.52 40.0 2.32e-01 100.0% 16.6%
3913070 331.4.1.3 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › AdenylateSensor 0.52 40.0 3.27e-01 100.0% 56.8%
3674297 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.52 44.0 3.01e-01 100.0% 54.3%
4030584 206.1.1.10 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase 0.51 41.0 2.40e-01 100.0% 18.7%