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OQ326496.2__WDQ45531.1__X__00057
Bact-VirOQ326496.2__WDQ45531.1__X__00057
Identity
- Accession:
- OQ326496 ↗
- Kingdom:
- phage
Quality
84.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 9-94
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7z7vE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.62 | 36.0 | 4.09e-01 | 77.9% | 80.0% |
| 2kvcA01 | 1.10.150.430 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF3349, helical bundle | 0.61 | 37.0 | 3.70e-01 | 83.7% | 58.0% |
| 4gw9A01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.59 | 46.0 | 3.48e-01 | 84.9% | 84.2% |
| 1mhyG02 | 1.20.1280.30 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 | 0.57 | 37.0 | 3.99e-01 | 83.7% | 78.1% |
| 4fd4A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 37.0 | 2.80e-01 | 73.3% | 53.3% |
| 1nklA00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.51 | 36.0 | 3.76e-01 | 87.2% | 82.1% |
| 3qwwA03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 37.0 | 2.86e-01 | 95.3% | 34.6% |
| 1bbhA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.51 | 35.0 | 3.09e-01 | 72.1% | 87.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3749858 | 109.4.1.2791 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CNOT11, PF27642 | 0.63 | 37.0 | 2.34e-01 | 84.9% | 12.0% |
| 4109905 | 223.1.1.5 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HrcA | 0.62 | 50.0 | 3.93e-01 | 87.2% | 99.4% |
| 4557107 | 223.1.1.5 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HrcA | 0.57 | 50.0 | 4.03e-01 | 98.8% | 98.8% |
| 3592236 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.56 | 41.0 | 4.21e-01 | 100.0% | 80.0% |
| 5016958 | 101.1.11.17 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF2540 | 0.56 | 33.0 | 3.42e-01 | 90.7% | 61.3% |
| 4680651 | 223.1.1.5 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HrcA | 0.55 | 48.0 | 4.15e-01 | 98.8% | 99.3% |
| 4324922 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.54 | 43.0 | 4.38e-01 | 84.9% | 84.7% |
| 3235434 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.52 | 41.0 | 4.13e-01 | 86.0% | 85.6% |
| 5071743 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.51 | 40.0 | 2.81e-01 | 87.2% | 92.3% |
| 3805872 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.50 | 42.0 | 3.68e-01 | 89.5% | 78.4% |
D2
medium
residues 97-133
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6qm7M00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.79 | 65.0 | 4.06e-01 | 100.0% | 17.3% |
| 4wv4B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.76 | 61.0 | 4.73e-01 | 100.0% | 39.8% |
| 1vluA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.76 | 64.0 | 3.87e-01 | 100.0% | 56.2% |
| 1fmjA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 49.0 | 2.84e-01 | 75.7% | 44.2% |
| 5jnmA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.69 | 55.0 | 3.69e-01 | 100.0% | 23.6% |
| 5fmgG00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.67 | 50.0 | 3.28e-01 | 100.0% | 16.9% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.66 | 46.0 | 3.63e-01 | 78.4% | 32.9% |
| 1hlvA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 50.0 | 4.48e-01 | 100.0% | 58.3% |
| 4ywoA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.65 | 48.0 | 2.98e-01 | 91.9% | 14.2% |
| 3f0cA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 46.0 | 4.49e-01 | 97.3% | 69.4% |
| 3solA00 | 1.20.58.1630 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS | 0.63 | 51.0 | 3.86e-01 | 91.9% | 92.3% |
| 2lqxA00 | 6.10.250.1700 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 44.0 | 4.30e-01 | 81.1% | 70.7% |
| 2r18A02 | 1.10.8.880 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Birnavirus VP3 protein, domain 2 | 0.61 | 47.0 | 4.27e-01 | 100.0% | 67.8% |
| 4o1jA00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.60 | 48.0 | 3.14e-01 | 100.0% | 44.7% |
| 4j0eA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 47.0 | 3.08e-01 | 100.0% | 18.3% |
| 1jeyB03 | 1.10.1600.10 | Mainly Alpha › Orthogonal Bundle › Ku70; Chain: A; domain 4 › | 0.55 | 44.0 | 3.30e-01 | 100.0% | 33.3% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.52 | 39.0 | 3.50e-01 | 91.9% | 70.5% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3269813 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.77 | 61.0 | 3.67e-01 | 100.0% | 12.3% |
| 3330798 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.70 | 56.0 | 3.36e-01 | 100.0% | 12.5% |
| 4588595 | 244.1.1.9 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GMC_oxred_C | 0.62 | 50.0 | 3.21e-01 | 100.0% | 44.4% |