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OQ330851.1__WDS38385.1__W2_gp017__00016
Bact-VirOQ330851.1__WDS38385.1__W2_gp017__00016
Identity
- Accession:
- OQ330851 ↗
- Kingdom:
- phage
Quality
74.1
mean pLDDT
Cluster
View cluster (26 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-148
Domain cluster:
rep: pig_ID_885_F13_scaffold_14_curated_prodigal-single.1__X__X__00028__D17-130
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.78 | 47.0 | 4.35e-01 | 88.2% | 49.1% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.77 | 46.0 | 4.38e-01 | 86.1% | 51.2% |
| 3cddA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.73 | 47.0 | 4.32e-01 | 88.9% | 51.1% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.71 | 44.0 | 4.16e-01 | 87.5% | 51.7% |
| 3lqmA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 35.0 | 4.09e-01 | 84.7% | 70.6% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.67 | 43.0 | 5.13e-01 | 87.5% | 97.9% |
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.62 | 53.0 | 5.21e-01 | 92.4% | 97.4% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.60 | 36.0 | 3.87e-01 | 81.9% | 67.2% |
| 2yjlA00 | 2.60.40.2990 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 34.0 | 3.89e-01 | 96.5% | 75.0% |
| 1rz1A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 46.0 | 4.55e-01 | 89.6% | 77.0% |
| 3nfwA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 46.0 | 4.25e-01 | 89.6% | 66.5% |
| 4xhyA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 46.0 | 4.44e-01 | 90.3% | 74.5% |
| 4fzqA00 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.57 | 27.0 | 3.73e-01 | 79.2% | 86.1% |
| 4z85A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 45.0 | 4.06e-01 | 89.6% | 62.4% |
| 2d5wA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.56 | 40.0 | 4.36e-01 | 81.9% | 89.7% |
| 3w57A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.55 | 36.0 | 4.11e-01 | 94.4% | 86.5% |
| 2e1bA02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.53 | 41.0 | 4.37e-01 | 87.5% | 91.5% |
| 2gujA01 | 2.30.110.40 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Phage tail tube protein | 0.53 | 42.0 | 4.35e-01 | 88.9% | 91.7% |
| 1t17A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 37.0 | 3.75e-01 | 99.3% | 70.9% |
| 2r2cB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 4.30e-01 | 98.6% | 98.2% |
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 35.0 | 4.07e-01 | 83.3% | 96.1% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4988103 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.78 | 51.0 | 6.16e-01 | 88.9% | 98.9% |
| 4602833 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 68.0 | 7.08e-01 | 95.1% | 100.0% |
| 3941988 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 57.0 | 6.32e-01 | 91.7% | 100.0% |
| 2468519 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 51.0 | 6.04e-01 | 88.2% | 100.0% |
| 3283979 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 40.0 | 4.74e-01 | 94.4% | 81.0% |
| 4140243 | 1.1.5.82 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF2001 | 0.66 | 49.0 | 5.45e-01 | 92.4% | 97.4% |
| 5064585 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.64 | 26.0 | 3.29e-01 | 77.8% | 61.1% |
| 4982153 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.63 | 53.0 | 4.33e-01 | 91.0% | 49.3% |
| 3977123 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.63 | 54.0 | 5.21e-01 | 92.4% | 97.5% |
| 3058416 | 1.1.5.39 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › TssD | 0.60 | 49.0 | 5.15e-01 | 92.4% | 97.6% |
| 3942090 | 1.1.5.77 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube | 0.58 | 50.0 | 4.79e-01 | 92.4% | 89.1% |
| 3250865 | 11.1.4.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CBM_20 | 0.57 | 33.0 | 3.88e-01 | 92.4% | 82.0% |
| 3906392 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.56 | 37.0 | 3.87e-01 | 93.8% | 72.3% |
| 3231575 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 34.0 | 3.85e-01 | 96.5% | 80.9% |
| 3908612 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.54 | 36.0 | 3.72e-01 | 94.4% | 71.6% |
| 4998077 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.52 | 36.0 | 2.83e-01 | 77.8% | 34.0% |
| 3222792 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 32.0 | 3.70e-01 | 95.8% | 89.0% |
| 3231573 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 32.0 | 3.61e-01 | 85.4% | 82.7% |