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OQ331036.1__WCZ66270.1__X__00106

Bact-Vir

OQ331036.1__WCZ66270.1__X__00106

Identity

Accession:
OQ331036 ↗
Kingdom:
phage

Quality

78.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Yersinia_phage_MHG19

TaxID: 3025402

Cluster

View cluster (36 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-84
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.62 41.0 4.54e-01 100.0% 88.1%
2jn4A00 2.40.50.240 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NifT/FixU-like 0.58 37.0 3.93e-01 96.1% 74.2%
3nlcA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 48.0 3.43e-01 94.8% 82.3%
4fk1A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 48.0 4.27e-01 94.8% 97.3%
5agvA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.56 45.0 3.82e-01 89.6% 93.1%
4pqxA01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.53 39.0 4.00e-01 77.9% 100.0%
3vkgA03 3.20.180.20 Alpha Beta › Alpha-Beta Barrel › Split barrel-like › Dynein motor heavy chain, linker domain, subdomain 3 0.51 34.0 3.22e-01 96.1% 55.0%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
917 4087.1.1.1 ↗ beta barrels › NifT/FixU › NifT/FixU › NifT/FixU › NifT 0.58 37.0 3.93e-01 96.1% 74.2%
3741719 1195.1.1.0 ↗ a+b complex topology › Suppressor of hydroxyurea sensitivity protein 2 › Suppressor of hydroxyurea sensitivity protein 2 › Suppressor of hydroxyurea sensitivity protein 2 0.57 46.0 3.76e-01 90.9% 84.4%
3959660 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.55 41.0 3.34e-01 79.2% 90.2%
3649955 6.1.1.12 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Agglutinin 0.55 48.0 3.83e-01 100.0% 85.6%
5011464 243.6.1.9 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.54 40.0 3.95e-01 81.8% 85.9%
4237317 2.1.1.18 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.53 30.0 3.38e-01 72.7% 71.7%
4053762 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.51 38.0 3.36e-01 81.8% 84.2%
3479475 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.50 43.0 3.14e-01 100.0% 45.8%