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OQ338182.1__WID30660.1__X__00024
Bact-VirOQ338182.1__WID30660.1__X__00024
Identity
- Accession:
- OQ338182 ↗
- Kingdom:
- phage
Quality
68.2
mean pLDDT
Taxonomy
TaxID: 3028473
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-61
D2
high
residues 72-108_110-157
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1r6bX03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.74 | 48.0 | 4.81e-01 | 100.0% | 63.6% |
| 1wwiA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.66 | 59.0 | 4.94e-01 | 100.0% | 83.7% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.65 | 47.0 | 4.03e-01 | 75.3% | 56.4% |
| 1nv8B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.64 | 44.0 | 4.79e-01 | 98.8% | 85.9% |
| 5nl6B01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 48.0 | 4.28e-01 | 81.2% | 62.0% |
| 6bz0D01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.63 | 47.0 | 3.53e-01 | 81.2% | 35.8% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 45.0 | 4.55e-01 | 100.0% | 77.4% |
| 1qpcA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.60 | 38.0 | 2.99e-01 | 94.1% | 29.8% |
| 5ts9B00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.58 | 47.0 | 3.82e-01 | 98.8% | 46.6% |
| 3a1iA02 | 3.90.1300.10 | Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain | 0.58 | 50.0 | 3.22e-01 | 100.0% | 46.3% |
| 4b1bA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 42.0 | 2.76e-01 | 81.2% | 19.0% |
| 1rfyB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.56 | 46.0 | 4.60e-01 | 87.1% | 88.6% |
| 2l95A00 | 1.10.287.2250 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 38.0 | 3.94e-01 | 100.0% | 78.8% |
| 1oxjA02 | 1.25.40.170 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Smaug, PHAT domain | 0.53 | 31.0 | 2.87e-01 | 84.7% | 43.1% |
| 2y1eA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.53 | 34.0 | 3.43e-01 | 98.8% | 63.2% |
| 2cdqA02 | 1.20.120.1320 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartokinase, catalytic domain | 0.53 | 39.0 | 3.74e-01 | 100.0% | 68.0% |
| 1hciA04 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 39.0 | 3.62e-01 | 82.4% | 62.3% |
| 4qiwK00 | 3.90.940.10 | Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › RNA polymerase subunit, RPB6/omega | 0.52 | 31.0 | 3.71e-01 | 75.3% | 91.1% |
| 4pxoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.50 | 37.0 | 3.29e-01 | 81.2% | 51.1% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3163617 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.69 | 48.0 | 4.74e-01 | 100.0% | 67.8% |
| 4275249 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.67 | 51.0 | 3.79e-01 | 78.8% | 68.4% |
| 3694617 | 633.23.1.9 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 | 0.67 | 52.0 | 3.90e-01 | 83.5% | 88.1% |
| 3962918 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.64 | 48.0 | 3.65e-01 | 81.2% | 34.4% |
| 3958898 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.64 | 48.0 | 3.98e-01 | 81.2% | 46.8% |
| 3218398 | 603.2.1.43 ↗ | alpha bundles › STAT-like › STAT › STAT › DUF267 | 0.63 | 55.0 | 3.66e-01 | 100.0% | 79.5% |
| 3915562 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.61 | 47.0 | 4.20e-01 | 80.0% | 61.7% |
| 4095063 | 5086.1.1.69 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Med29 | 0.60 | 43.0 | 3.87e-01 | 74.1% | 57.3% |
| 3893414 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.59 | 47.0 | 4.41e-01 | 84.7% | 98.1% |
| 3777607 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.59 | 46.0 | 3.65e-01 | 85.9% | 91.4% |
| 3804939 | 192.2.1.3 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Rad50_zn_hook | 0.58 | 46.0 | 3.91e-01 | 85.9% | 73.6% |
| 3665032 | 2003.1.2.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2,Pyr_redox_2 | 0.58 | 43.0 | 3.22e-01 | 81.2% | 32.3% |
| 3858695 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 44.0 | 4.46e-01 | 100.0% | 87.1% |
| 4514588 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.56 | 42.0 | 3.52e-01 | 77.6% | 55.7% |
| 3996707 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.54 | 41.0 | 3.80e-01 | 82.4% | 64.5% |
| 3484940 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.53 | 42.0 | 3.79e-01 | 83.5% | 71.3% |
| 3183395 | 108.1.1.14 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF_assoc_2 | 0.53 | 47.0 | 4.12e-01 | 98.8% | 65.6% |
| 3243368 | 633.24.1.4 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › RIN1 | 0.53 | 39.0 | 3.66e-01 | 78.8% | 63.8% |
| 3700349 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.52 | 39.0 | 3.14e-01 | 78.8% | 44.2% |
| 4926806 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 35.0 | 3.46e-01 | 78.8% | 67.8% |