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OQ338183.1__WID30765.1__KCIQHHLO_70__00071

Bact-Vir

OQ338183.1__WID30765.1__KCIQHHLO_70__00071

Identity

Accession:
OQ338183 ↗
Kingdom:
phage

Quality

92.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Triavirus› Staphylococcus_phage_HMGUsa1

TaxID: 3028475

Cluster

View cluster (36 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-63
PDB
Domain cluster: rep: MF158042.1__ATE86123.1__Sd1_gp57__00056__D2-50
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yn3A00 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.82 50.0 4.27e-01 100.0% 39.8%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 56.0 5.95e-01 100.0% 94.5%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 53.0 5.18e-01 98.4% 71.2%
2z8lA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.73 48.0 3.86e-01 100.0% 35.9%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 52.0 5.09e-01 100.0% 71.2%
2yn5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 44.0 4.07e-01 100.0% 51.9%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 54.0 5.64e-01 100.0% 94.8%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 45.0 4.95e-01 93.5% 89.8%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 48.0 4.84e-01 98.4% 80.6%
4flnA02 3.20.190.20 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › 0.65 56.0 4.28e-01 100.0% 86.2%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.62 42.0 4.52e-01 98.4% 86.0%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.61 46.0 4.54e-01 95.2% 75.8%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 52.0 4.95e-01 100.0% 82.2%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.59 51.0 4.53e-01 98.4% 68.8%
3in6A02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 45.0 3.70e-01 100.0% 44.4%
4c92F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 52.0 4.90e-01 100.0% 83.1%
2r6fA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.59 43.0 4.17e-01 80.6% 97.2%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.58 47.0 4.43e-01 100.0% 72.7%
4c92A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 52.0 4.07e-01 100.0% 50.0%
4c92C00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 51.0 4.68e-01 98.4% 83.5%
6v4xC01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 48.0 4.16e-01 100.0% 60.0%
5bncB01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 42.0 3.19e-01 100.0% 33.6%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 39.0 3.78e-01 100.0% 66.7%
5yrzB00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.54 36.0 3.74e-01 82.3% 75.9%
2vc8A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 44.0 4.27e-01 100.0% 81.9%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 46.0 3.43e-01 100.0% 41.1%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.53 44.0 3.82e-01 93.5% 87.6%
1hlcA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 3.66e-01 100.0% 79.8%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.52 44.0 3.19e-01 100.0% 83.1%
1fx7B03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.52 43.0 4.07e-01 100.0% 82.5%
1c1fA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 45.0 3.57e-01 100.0% 80.7%
2cduA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 44.0 3.41e-01 100.0% 59.6%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.51 38.0 3.98e-01 88.7% 92.9%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 37.0 3.69e-01 100.0% 72.1%
3bn6A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 35.0 2.79e-01 75.8% 93.7%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 36.0 3.58e-01 100.0% 72.7%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 42.0 4.06e-01 95.2% 91.4%
4obiA00 2.60.320.10 Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain 0.51 45.0 4.02e-01 100.0% 96.6%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 42.0 4.21e-01 96.8% 100.0%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 40.0 3.65e-01 95.2% 65.1%
2pwyA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.50 41.0 4.28e-01 98.4% 100.0%
6b4oA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 42.0 3.54e-01 100.0% 75.4%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3959440 4.1.1.180 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3107 0.80 72.0 7.13e-01 100.0% 98.5%
25624 4.1.1.45 ↗ beta barrels › SH3 › SH3 › SH3 › DUF903 0.76 59.0 6.32e-01 98.4% 98.1%
135648 4.1.1.142 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq_1 0.74 54.0 5.35e-01 98.4% 73.8%
5027750 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 55.0 5.87e-01 100.0% 90.9%
3979842 4.1.1.45 ↗ beta barrels › SH3 › SH3 › SH3 › DUF903 0.71 56.0 5.87e-01 100.0% 94.5%
4400642 4.1.1.257 ↗ beta barrels › SH3 › SH3 › SH3 › Flag1_repress 0.69 50.0 4.52e-01 98.4% 56.5%
4540843 4.1.1.434 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2642 0.68 49.0 4.88e-01 100.0% 73.8%
3373766 7.1.1.7 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_3 0.66 58.0 4.42e-01 100.0% 87.3%
5002601 4.1.1.485 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6897 0.66 47.0 4.87e-01 96.8% 79.7%
3712219 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.66 50.0 4.99e-01 100.0% 80.0%
3590658 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 58.0 5.64e-01 100.0% 92.9%
4214438 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 51.0 5.08e-01 100.0% 81.5%
4142364 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.66 44.0 4.34e-01 95.2% 64.6%
4368811 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.66 48.0 5.00e-01 100.0% 87.3%
3645831 7.1.1.7 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_3 0.66 57.0 4.33e-01 100.0% 91.0%
3422531 7.1.1.7 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_3 0.65 48.0 4.55e-01 80.6% 93.3%
5000741 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.64 49.0 4.84e-01 100.0% 76.9%
5028741 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 46.0 4.81e-01 96.8% 89.1%
5080336 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 48.0 4.75e-01 98.4% 79.7%
5053906 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.63 49.0 5.05e-01 100.0% 88.3%
5029405 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.63 45.0 4.74e-01 98.4% 87.3%
2697704 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.63 41.0 4.13e-01 96.8% 64.6%
4139090 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.63 46.0 4.80e-01 100.0% 89.1%
5056826 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.62 48.0 4.76e-01 100.0% 80.0%
4277213 4.1.1.431 ↗ beta barrels › SH3 › SH3 › SH3 › PF27152 0.62 45.0 4.33e-01 98.4% 68.6%
4459365 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 49.0 4.52e-01 100.0% 67.5%
3290899 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.62 45.0 4.40e-01 98.4% 70.0%
4971470 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.61 47.0 4.49e-01 100.0% 69.3%
4093911 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.61 47.0 4.47e-01 100.0% 70.7%
4252954 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.61 47.0 4.59e-01 100.0% 77.1%
4662947 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.60 41.0 4.07e-01 96.8% 67.7%
4044269 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.60 45.0 4.41e-01 100.0% 72.9%
4347999 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.60 42.0 4.14e-01 96.8% 69.2%
4432457 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.60 44.0 4.34e-01 100.0% 74.3%
5050320 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.59 46.0 4.33e-01 100.0% 69.3%
3278801 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.59 40.0 4.01e-01 98.4% 69.2%
4226849 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.59 45.0 4.21e-01 100.0% 66.3%
4071824 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.58 47.0 4.50e-01 100.0% 74.7%
4554867 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.58 45.0 4.47e-01 100.0% 81.5%
3787684 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.58 52.0 4.36e-01 100.0% 73.3%
4158712 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.58 44.0 4.32e-01 100.0% 75.7%
3954254 4.1.1.387 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Rv0428c 0.57 44.0 4.42e-01 98.4% 83.1%
5081091 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 51.0 4.42e-01 100.0% 86.3%
4331473 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.57 41.0 3.86e-01 98.4% 61.3%
4979291 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.57 44.0 4.18e-01 100.0% 70.7%
5048974 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 50.0 4.14e-01 100.0% 55.5%
4982354 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.57 47.0 4.64e-01 98.4% 87.7%
4083915 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.56 45.0 4.28e-01 100.0% 76.0%
3037102 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 38.0 3.87e-01 100.0% 74.2%
3688820 210.2.1.1 ↗ a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.55 41.0 2.66e-01 82.3% 87.3%
4284778 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.55 44.0 4.24e-01 100.0% 77.3%
3299797 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.54 37.0 3.81e-01 100.0% 76.7%
3256431 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.54 35.0 3.30e-01 96.8% 52.5%
3931904 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.54 36.0 3.75e-01 96.8% 80.0%
4024913 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 37.0 3.68e-01 96.8% 69.2%
3781711 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.52 34.0 3.58e-01 91.9% 74.5%
5059830 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.51 45.0 4.02e-01 100.0% 74.4%
3523918 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.51 39.0 3.94e-01 96.8% 83.1%
4157193 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.51 43.0 4.18e-01 100.0% 97.1%
4191690 4.1.1.98 ↗ beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.51 33.0 3.44e-01 93.5% 72.4%
3401198 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.51 42.0 3.78e-01 95.2% 74.4%
3173941 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 35.0 3.08e-01 98.4% 46.0%
3553983 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.50 37.0 3.82e-01 96.8% 86.7%
4993871 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.50 45.0 3.62e-01 98.4% 57.4%
3554026 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.50 38.0 3.85e-01 96.8% 86.7%
2427475 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 35.0 3.49e-01 96.8% 70.1%