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OQ357865.1__WDS61311.1__SEA_MINIFLAYER_4__00004
Bact-VirOQ357865.1__WDS61311.1__SEA_MINIFLAYER_4__00004
Identity
- Accession:
- OQ357865 ↗
- Kingdom:
- phage
Quality
75.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 58-121
Domain cluster:
rep: NC_070829.1__YP_010655501.1__PP630_gp010__00010__D102-187
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gr2A00 | 1.10.1200.210 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Chaperonin-like RbcX | 0.73 | 50.0 | 4.11e-01 | 70.3% | 69.1% |
| 3hwcA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.67 | 49.0 | 3.37e-01 | 76.6% | 66.2% |
| 3ljcA02 | 1.20.58.1480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 46.0 | 3.74e-01 | 73.4% | 61.1% |
| 4itjB02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.66 | 49.0 | 3.53e-01 | 100.0% | 27.1% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 51.0 | 4.69e-01 | 82.8% | 74.4% |
| 2lwxA00 | 1.10.8.840 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain | 0.65 | 53.0 | 4.84e-01 | 93.8% | 97.7% |
| 5lohA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.64 | 47.0 | 3.49e-01 | 95.3% | 29.0% |
| 1zxeC02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.64 | 47.0 | 3.45e-01 | 100.0% | 28.2% |
| 3robA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 55.0 | 4.35e-01 | 98.4% | 100.0% |
| 5grqA00 | 1.10.8.810 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Daxx helical bundle domain | 0.63 | 51.0 | 4.54e-01 | 89.1% | 82.2% |
| 7r0kA01 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.61 | 42.0 | 3.56e-01 | 96.9% | 42.6% |
| 3w6bB00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.60 | 48.0 | 3.76e-01 | 92.2% | 96.1% |
| 1nu7D02 | 1.20.120.760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Staphylcoagulase, helix bundle, domain 2 | 0.59 | 46.0 | 3.73e-01 | 87.5% | 58.6% |
| 2p1aB01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.58 | 45.0 | 3.43e-01 | 84.4% | 93.8% |
| 3cfxA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 42.0 | 3.15e-01 | 79.7% | 59.9% |
| 1wscA01 | 3.30.700.20 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Hypothetical protein ph0010; domain 1 | 0.57 | 39.0 | 2.96e-01 | 71.9% | 81.9% |
| 1t3aA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.56 | 49.0 | 3.04e-01 | 100.0% | 62.0% |
| 3kkgA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 47.0 | 3.64e-01 | 96.9% | 93.1% |
| 3d9rB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 46.0 | 3.75e-01 | 100.0% | 97.7% |
| 2r4iA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 45.0 | 3.76e-01 | 98.4% | 98.4% |
| 3vwaA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.53 | 45.0 | 3.55e-01 | 100.0% | 54.5% |
| 6ks6A02 | 3.30.260.10 | Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain | 0.52 | 44.0 | 3.78e-01 | 98.4% | 74.1% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3708807 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.68 | 53.0 | 3.96e-01 | 82.8% | 63.9% |
| 3493458 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.66 | 45.0 | 3.44e-01 | 71.9% | 67.3% |
| 4183916 | 2004.1.1.59 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CoaE | 0.66 | 54.0 | 3.81e-01 | 93.8% | 92.6% |
| 3993227 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.65 | 48.0 | 3.06e-01 | 100.0% | 15.5% |
| 143237 | 243.1.1.28 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 | 0.63 | 55.0 | 4.35e-01 | 98.4% | 100.0% |
| 4030271 | 601.7.1.16 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN_Swt1 | 0.62 | 48.0 | 3.72e-01 | 84.4% | 85.7% |
| 3314195 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.61 | 51.0 | 3.34e-01 | 100.0% | 31.8% |
| 3822958 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.59 | 43.0 | 3.24e-01 | 79.7% | 80.0% |
| 3588934 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.58 | 42.0 | 4.19e-01 | 79.7% | 86.2% |
| 3182707 | 109.3.1.151 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › GCP5-Mod21_N | 0.57 | 49.0 | 4.49e-01 | 96.9% | 91.8% |
| 3190885 | 601.19.1.21 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › DUF7605 | 0.54 | 46.0 | 3.38e-01 | 96.9% | 60.6% |
| 3614292 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.54 | 42.0 | 2.97e-01 | 81.2% | 32.9% |
| 4126330 | 101.1.9.33 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF536 | 0.52 | 37.0 | 2.97e-01 | 78.1% | 35.9% |
| 3267934 | 3525.1.1.1 ↗ | alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › BET | 0.51 | 36.0 | 3.61e-01 | 73.4% | 75.4% |
| 3680927 | 3542.1.1.3 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Peptidase_A22B | 0.51 | 44.0 | 2.83e-01 | 96.9% | 36.5% |
| 4926955 | 6049.1.1.0 ↗ | alpha bundles › PH0832-like › PH0832-like › PH0832-like | 0.50 | 40.0 | 3.43e-01 | 89.1% | 55.0% |
| 3675610 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.50 | 37.0 | 3.19e-01 | 79.7% | 61.9% |