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OQ359889.1__WDR22161.1__PJM41_0076__00076
Bact-VirOQ359889.1__WDR22161.1__PJM41_0076__00076
Identity
- Accession:
- OQ359889 ↗
- Kingdom:
- phage
Quality
79.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Demerecviridae›
Epseptimavirus›
Salmonella_phage_vB_SenS_UTK0009
TaxID: 3028908
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-96
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4c47A01 | 2.60.40.1620 | Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like | 0.58 | 48.0 | 4.12e-01 | 100.0% | 56.6% |
| 4m0wA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 41.0 | 3.36e-01 | 97.3% | 42.3% |
| 2dmkA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.67e-01 | 98.6% | 58.3% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 40.0 | 3.29e-01 | 97.3% | 43.1% |
| 2vrqA01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 37.0 | 3.18e-01 | 100.0% | 43.9% |
| 1f3vA00 | 3.30.70.680 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TRADD, N-terminal domain | 0.51 | 43.0 | 3.49e-01 | 100.0% | 81.6% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4541077 | 3767.1.1.0 ↗ | a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain | 0.61 | 43.0 | 3.55e-01 | 100.0% | 38.6% |
| 3982359 | 11.19.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › YajI-like › YajI-like | 0.59 | 49.0 | 4.14e-01 | 100.0% | 53.1% |
| 3932016 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.58 | 48.0 | 4.28e-01 | 98.6% | 62.7% |
| 4944727 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 43.0 | 3.62e-01 | 100.0% | 45.0% |
| 5077834 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.55 | 47.0 | 3.22e-01 | 98.6% | 100.0% |
| 4932825 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 40.0 | 3.86e-01 | 97.3% | 70.6% |
| 4935248 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 39.0 | 3.13e-01 | 80.8% | 90.7% |
| 3992025 | 11.1.5.18 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CP2 | 0.52 | 44.0 | 3.17e-01 | 98.6% | 46.8% |
| 3929726 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.51 | 43.0 | 3.77e-01 | 98.6% | 60.9% |
| 4157284 | 9.7.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Metalloprotease inhibitor › Metalloprotease inhibitor › Inh | 0.51 | 42.0 | 3.83e-01 | 94.5% | 97.1% |
| 2439596 | 11.1.1.261 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TQ | 0.51 | 44.0 | 3.45e-01 | 98.6% | 54.9% |
| 4941509 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 39.0 | 3.25e-01 | 97.3% | 45.0% |
| 3190639 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.50 | 35.0 | 2.73e-01 | 74.0% | 66.5% |
| 3726266 | 3363.1.1.0 ↗ | beta sandwiches › avirulence protein AvrPiz-t homologs › avirulence protein AvrPiz-t homologs › avirulence protein AvrPiz-t homologs | 0.50 | 42.0 | 4.00e-01 | 97.3% | 93.3% |