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OQ361773.1__WDS61797.1__X__00255
Bact-VirOQ361773.1__WDS61797.1__X__00255
Identity
- Accession:
- OQ361773 ↗
- Kingdom:
- phage
Quality
71.6
mean pLDDT
Taxonomy
TaxID: 3020854
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-67
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7vbnL01 | 3.30.160.190 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › atu1810 like domain | 0.76 | 55.0 | 4.84e-01 | 75.8% | 82.1% |
| 2jwkA00 | 3.30.420.270 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.73 | 64.0 | 6.23e-01 | 100.0% | 91.9% |
| 4m7xA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.72 | 59.0 | 5.36e-01 | 95.5% | 65.9% |
| 3lm2A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.68 | 59.0 | 5.25e-01 | 98.5% | 86.6% |
| 7uqyB01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.65 | 45.0 | 3.22e-01 | 100.0% | 22.9% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.65 | 45.0 | 4.58e-01 | 74.2% | 93.9% |
| 1m56B02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.63 | 56.0 | 4.25e-01 | 100.0% | 58.8% |
| 2lleA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 54.0 | 3.71e-01 | 98.5% | 29.5% |
| 1x9mA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.62 | 52.0 | 3.62e-01 | 95.5% | 36.3% |
| 8oqxA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.62 | 52.0 | 4.49e-01 | 100.0% | 72.8% |
| 2ph1A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 50.0 | 3.58e-01 | 100.0% | 65.2% |
| 2agkA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 53.0 | 3.68e-01 | 100.0% | 28.3% |
| 4gj1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 53.0 | 3.65e-01 | 100.0% | 31.0% |
| 2ebnA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 50.0 | 3.42e-01 | 100.0% | 42.5% |
| 4n9jA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.58 | 42.0 | 3.59e-01 | 78.8% | 47.7% |
| 2e9hA02 | 2.20.25.350 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.57 | 34.0 | 3.98e-01 | 83.3% | 90.9% |
| 6pzjA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 41.0 | 3.28e-01 | 80.3% | 52.7% |
| 4c0kA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 45.0 | 3.92e-01 | 93.9% | 57.3% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 31.0 | 3.44e-01 | 93.9% | 66.7% |
| 5r0dB01 | 2.60.34.20 | Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › | 0.56 | 39.0 | 3.08e-01 | 74.2% | 71.3% |
| 7cr6D01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.55 | 47.0 | 4.41e-01 | 100.0% | 76.8% |
| 2k4vA00 | 3.30.160.370 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 | 0.54 | 40.0 | 3.32e-01 | 80.3% | 79.2% |
| 2gkpA00 | 3.40.1590.10 | Alpha Beta › 3-Layer(aba) Sandwich › NMB0488-like fold › NMB0488-like | 0.53 | 46.0 | 3.49e-01 | 98.5% | 88.3% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4966816 | 2484.1.1.23 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydantoinase_A | 0.74 | 63.0 | 5.18e-01 | 95.5% | 68.3% |
| 4936503 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.73 | 61.0 | 5.08e-01 | 93.9% | 66.7% |
| 4958926 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.73 | 62.0 | 5.37e-01 | 95.5% | 77.1% |
| 3396736 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.72 | 51.0 | 5.17e-01 | 74.2% | 95.4% |
| 3720049 | 2484.1.1.191 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RHSP | 0.72 | 60.0 | 5.11e-01 | 93.9% | 58.2% |
| 3938255 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 63.0 | 4.28e-01 | 100.0% | 29.6% |
| 4985980 | 2484.1.1.21 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG | 0.71 | 62.0 | 4.23e-01 | 100.0% | 54.6% |
| 3217638 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.70 | 59.0 | 5.73e-01 | 95.5% | 90.7% |
| 3718212 | 2004.1.1.427 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N | 0.69 | 58.0 | 3.64e-01 | 93.9% | 17.5% |
| 3702955 | 2004.1.1.427 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N | 0.69 | 57.0 | 4.00e-01 | 93.9% | 28.0% |
| 4249934 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.69 | 58.0 | 4.76e-01 | 93.9% | 65.8% |
| 4009809 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 59.0 | 4.85e-01 | 100.0% | 78.4% |
| 3705090 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 59.0 | 5.16e-01 | 98.5% | 95.0% |
| 5071929 | 2002.1.1.142 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MTTB | 0.67 | 54.0 | 3.21e-01 | 100.0% | 12.1% |
| 2391944 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.67 | 42.0 | 3.78e-01 | 100.0% | 47.7% |
| 3985978 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.67 | 45.0 | 4.11e-01 | 71.2% | 77.8% |
| 3221034 | 2484.6.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR | 0.66 | 55.0 | 5.20e-01 | 93.9% | 80.0% |
| 3602836 | 284.1.3.6 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › DUF749 | 0.64 | 48.0 | 4.26e-01 | 83.3% | 88.0% |
| 4996687 | 2004.1.1.175 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA | 0.63 | 53.0 | 3.54e-01 | 100.0% | 52.8% |
| 4988427 | 2003.1.5.26 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_28 | 0.63 | 42.0 | 2.69e-01 | 95.5% | 13.0% |
| 4942756 | 3407.1.1.2 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc | 0.63 | 53.0 | 4.36e-01 | 93.9% | 60.8% |
| 4026478 | 2004.1.1.45 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MutS_V | 0.61 | 49.0 | 2.79e-01 | 93.9% | 8.2% |
| 3370665 | 2004.1.1.437 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA, AAA_31 | 0.61 | 51.0 | 3.45e-01 | 100.0% | 53.0% |
| 4596531 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.61 | 42.0 | 4.18e-01 | 74.2% | 68.6% |
| 3969513 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 50.0 | 3.44e-01 | 100.0% | 56.3% |
| 4595399 | 2004.1.1.437 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA, AAA_31 | 0.60 | 49.0 | 3.40e-01 | 100.0% | 58.5% |
| 4995506 | 2004.1.1.175 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA | 0.60 | 49.0 | 3.39e-01 | 100.0% | 56.7% |
| 5013117 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 39.0 | 3.95e-01 | 100.0% | 67.7% |
| 3616888 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.60 | 50.0 | 3.35e-01 | 98.5% | 22.0% |
| None | — | 0.59 | 48.0 | 3.35e-01 | 100.0% | 58.6% | |
| 5024386 | 2484.4.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like | 0.58 | 46.0 | 4.10e-01 | 90.9% | 63.0% |
| 3448558 | 880.1.1.1 ↗ | a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind | 0.58 | 49.0 | 2.93e-01 | 100.0% | 70.0% |
| None | — | 0.57 | 47.0 | 3.25e-01 | 100.0% | 62.3% | |
| 3311773 | 880.1.1.1 ↗ | a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind | 0.57 | 48.0 | 2.97e-01 | 100.0% | 73.8% |
| 3716928 | 2008.1.1.107 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD | 0.57 | 46.0 | 3.35e-01 | 89.4% | 43.4% |
| 4953504 | 7516.1.1.11 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CTP_transf_3 | 0.56 | 47.0 | 3.20e-01 | 95.5% | 26.7% |
| 3273838 | 2006.1.1.35 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Pex22_HAD-like | 0.56 | 48.0 | 3.88e-01 | 98.5% | 85.2% |
| 5051960 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 38.0 | 2.98e-01 | 72.7% | 74.8% |
| 4041935 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.54 | 37.0 | 3.74e-01 | 71.2% | 92.3% |
| None | — | 0.54 | 41.0 | 2.58e-01 | 83.3% | 59.5% | |
| 4492912 | 4263.2.1.1 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › FtsH_ext | 0.54 | 36.0 | 3.61e-01 | 72.7% | 67.1% |
| 5058682 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.53 | 44.0 | 3.20e-01 | 100.0% | 44.1% |
| 5079134 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.53 | 43.0 | 2.78e-01 | 95.5% | 51.9% |
| 3280900 | 2004.1.1.192 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_18 | 0.52 | 43.0 | 3.35e-01 | 93.9% | 40.7% |
| 4932280 | 3407.1.1.0 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.52 | 37.0 | 3.40e-01 | 75.8% | 91.1% |
| 4998319 | 246.2.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases | 0.52 | 46.0 | 2.92e-01 | 100.0% | 25.0% |
| 3266504 | 2006.1.1.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NIF | 0.51 | 41.0 | 3.05e-01 | 98.5% | 32.0% |
| 4424322 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.50 | 32.0 | 3.40e-01 | 92.4% | 73.3% |