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OQ363659.1__WDS62387.1__X__00366

Bact-Vir

OQ363659.1__WDS62387.1__X__00366

Identity

Accession:
OQ363659 ↗
Kingdom:
phage

Quality

82.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_D6

TaxID: 3025445

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 4-80
PDB
Domain cluster: rep: OQ921344.1__WIT27511.1__X__00147__D15-89
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 56.0 6.07e-01 100.0% 98.4%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 53.0 5.60e-01 94.8% 97.0%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 49.0 4.93e-01 89.6% 73.8%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 47.0 5.28e-01 85.7% 98.2%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 50.0 5.49e-01 87.0% 98.4%
2epdA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 51.0 5.15e-01 92.2% 81.6%
1y0mA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 48.0 5.25e-01 88.3% 96.7%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 47.0 5.17e-01 87.0% 100.0%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 48.0 5.16e-01 90.9% 95.3%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 45.0 4.76e-01 89.6% 85.3%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 48.0 4.93e-01 92.2% 85.1%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 43.0 4.62e-01 88.3% 86.2%
6uy8A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 44.0 4.88e-01 92.2% 98.3%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 45.0 4.83e-01 100.0% 96.8%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 44.0 4.16e-01 90.9% 60.2%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 46.0 4.67e-01 89.6% 82.7%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 44.0 4.78e-01 88.3% 100.0%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 44.0 4.79e-01 87.0% 100.0%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 42.0 4.40e-01 98.7% 78.9%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 42.0 4.61e-01 88.3% 93.3%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 47.0 4.94e-01 90.9% 94.1%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 47.0 4.67e-01 100.0% 81.0%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 45.0 4.75e-01 90.9% 94.0%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 46.0 4.72e-01 93.5% 89.2%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.57 39.0 4.06e-01 81.8% 77.5%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 49.0 4.08e-01 100.0% 69.8%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 43.0 4.06e-01 85.7% 71.9%
2l2fA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.56 46.0 4.19e-01 93.5% 91.7%
2h7fX02 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.56 41.0 2.97e-01 80.5% 30.7%
3apuB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 48.0 3.79e-01 100.0% 68.0%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 48.0 3.88e-01 100.0% 71.2%
1avgI00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 45.0 3.77e-01 93.5% 79.6%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.55 46.0 4.28e-01 97.4% 81.7%
1egxA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 44.0 3.95e-01 93.5% 82.6%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 44.0 3.93e-01 92.2% 68.8%
1jb7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 42.0 3.76e-01 90.9% 93.1%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 42.0 3.51e-01 90.9% 85.1%
1gvzA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 46.0 4.01e-01 100.0% 66.9%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 33.0 3.45e-01 79.2% 71.6%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.52 36.0 3.09e-01 75.3% 82.9%
6eotD01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.51 42.0 2.59e-01 90.9% 41.9%
1ealA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 43.0 3.79e-01 100.0% 97.6%
5o16B00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.51 40.0 2.87e-01 90.9% 72.4%
1v5mA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 40.0 3.45e-01 92.2% 77.2%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.50 32.0 3.41e-01 75.3% 77.8%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 42.0 3.48e-01 100.0% 70.7%
ECOD (83)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4028731 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 54.0 5.87e-01 100.0% 96.9%
3885695 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 50.0 5.02e-01 88.3% 73.8%
3561013 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 51.0 5.20e-01 90.9% 81.3%
3476188 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 49.0 5.01e-01 87.0% 78.7%
3930461 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 50.0 5.07e-01 88.3% 80.0%
3900208 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 50.0 5.35e-01 94.8% 93.8%
3620934 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.68 51.0 5.04e-01 90.9% 77.5%
3631298 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 52.0 5.26e-01 96.1% 85.3%
3554162 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 51.0 5.48e-01 92.2% 96.9%
3270547 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 48.0 5.12e-01 88.3% 89.2%
157526 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 51.0 5.48e-01 93.5% 100.0%
3372822 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 50.0 5.09e-01 100.0% 84.0%
3267416 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 50.0 5.01e-01 96.1% 77.5%
4208181 4.1.1.70 ↗ beta barrels › SH3 › SH3 › SH3 › Tsr0524-like 0.67 50.0 5.33e-01 93.5% 95.4%
3231704 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 50.0 5.38e-01 88.3% 95.4%
3554293 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.67 49.0 5.28e-01 93.5% 93.8%
3218194 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 50.0 5.12e-01 94.8% 82.7%
3750163 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 48.0 4.99e-01 93.5% 82.9%
3907870 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 48.0 4.84e-01 89.6% 75.9%
4082863 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 49.0 5.09e-01 89.6% 87.1%
4878827 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.66 50.0 5.41e-01 93.5% 100.0%
3222195 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 49.0 5.23e-01 96.1% 93.8%
3503780 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.66 49.0 5.21e-01 100.0% 96.9%
3210707 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 47.0 5.17e-01 88.3% 98.3%
3486717 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 50.0 5.29e-01 98.7% 100.0%
3777744 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 47.0 4.53e-01 88.3% 66.7%
3936225 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 47.0 4.86e-01 85.7% 84.3%
3217113 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 45.0 4.82e-01 90.9% 86.2%
3788021 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 50.0 5.09e-01 92.2% 86.7%
3211367 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 49.0 4.71e-01 92.2% 71.1%
3290564 4.1.1.292 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 0.64 58.0 5.51e-01 100.0% 86.7%
3416133 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 46.0 4.68e-01 90.9% 77.3%
4016742 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 49.0 5.11e-01 100.0% 94.3%
3179932 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 49.0 5.02e-01 100.0% 88.0%
3623785 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 48.0 4.85e-01 92.2% 82.7%
3482680 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 47.0 5.07e-01 90.9% 93.8%
3999507 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 50.0 5.24e-01 89.6% 94.3%
3581631 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.63 46.0 4.96e-01 89.6% 92.3%
3999846 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 47.0 4.76e-01 90.9% 81.3%
3895391 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 45.0 4.53e-01 90.9% 75.0%
3787441 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 48.0 4.58e-01 89.6% 71.1%
3227565 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 46.0 5.04e-01 89.6% 100.0%
3583296 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.62 48.0 5.01e-01 92.2% 91.4%
3503782 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 44.0 4.73e-01 90.9% 96.7%
3879132 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 48.0 4.88e-01 92.2% 85.3%
3899828 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.62 44.0 4.44e-01 90.9% 73.8%
3479042 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 48.0 5.01e-01 97.4% 92.9%
4218488 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 47.0 4.72e-01 89.6% 80.0%
3252839 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 51.0 5.19e-01 100.0% 92.0%
3480656 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.61 54.0 4.71e-01 97.4% 71.3%
3236896 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 45.0 4.72e-01 89.6% 88.6%
3214006 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 49.0 4.22e-01 90.9% 76.9%
3566631 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 46.0 4.59e-01 92.2% 78.8%
3482646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 47.0 3.56e-01 97.4% 33.0%
3743464 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.61 46.0 4.66e-01 90.9% 84.0%
3890642 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 48.0 3.98e-01 87.0% 89.3%
3475756 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 44.0 4.49e-01 89.6% 82.7%
3914346 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 49.0 4.68e-01 100.0% 77.8%
3710561 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.60 46.0 4.90e-01 92.2% 98.5%
3991896 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 49.0 4.69e-01 100.0% 77.9%
3555993 4.1.1.77 ↗ beta barrels › SH3 › SH3 › SH3 › VGCC_beta4Aa_N 0.60 45.0 3.97e-01 83.1% 59.2%
3549597 4.1.1.77 ↗ beta barrels › SH3 › SH3 › SH3 › VGCC_beta4Aa_N 0.59 47.0 4.09e-01 90.9% 69.2%
3767975 220.1.1.38 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.59 48.0 4.29e-01 88.3% 73.6%
3521739 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.59 42.0 4.15e-01 90.9% 70.6%
3897602 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 51.0 4.82e-01 100.0% 80.0%
3938415 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.58 45.0 4.82e-01 87.0% 100.0%
3174580 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 45.0 4.41e-01 90.9% 78.8%
3670468 4.1.1.332 ↗ beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 0.58 49.0 4.26e-01 100.0% 63.8%
3664869 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.57 51.0 3.69e-01 100.0% 51.8%
3786978 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 45.0 4.74e-01 90.9% 98.6%
160765 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 44.0 4.46e-01 89.6% 88.3%
3575253 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 43.0 4.46e-01 92.2% 94.3%
3170649 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 49.0 4.78e-01 100.0% 92.9%
4114942 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.55 47.0 3.72e-01 100.0% 67.4%
3624228 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 45.0 4.55e-01 92.2% 98.7%
3960453 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.54 44.0 3.62e-01 90.9% 82.8%
3470252 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.53 45.0 4.08e-01 97.4% 79.1%
3398379 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 42.0 3.76e-01 92.2% 81.7%
4012865 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.52 38.0 3.11e-01 79.2% 75.5%
3198759 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.52 41.0 3.86e-01 88.3% 78.9%
3871253 220.1.1.122 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › C2_SHIP1-2_first 0.51 40.0 3.32e-01 85.7% 48.6%
3231961 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 44.0 4.12e-01 97.4% 87.4%
3517323 3131.1.1.2 ↗ a+b two layers › FYR domain › FYR domain › FYR domain › FYRN 0.50 42.0 3.88e-01 100.0% 71.8%