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OQ363659.1__WDS62426.1__X__00405
Bact-VirOQ363659.1__WDS62426.1__X__00405
Identity
- Accession:
- OQ363659 ↗
- Kingdom:
- phage
Quality
68.9
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-144
Domain cluster:
rep: LacPavin_0818_WC45_scaffold_160996_curated_closed_complete_prodigal-single.1__X__X__00128__D36-63_76-112_128-168
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8an5A01 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.76 | 69.0 | 6.20e-01 | 97.2% | 81.8% |
| 4wqkA00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.76 | 69.0 | 6.41e-01 | 97.9% | 92.0% |
| 2fclA00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.73 | 66.0 | 6.41e-01 | 97.2% | 99.4% |
| 3er9B03 | 3.30.460.60 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Poxvirus poly(A) polymerase, nucleotidyltransferase domain | 0.71 | 50.0 | 5.13e-01 | 70.9% | 84.2% |
| 4o8sA01 | 3.10.450.620 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain | 0.67 | 46.0 | 4.93e-01 | 70.9% | 92.8% |
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.64 | 29.0 | 4.27e-01 | 75.9% | 96.8% |
| 3ajfA00 | 1.20.1440.190 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tenuivirus movement protein | 0.64 | 29.0 | 3.61e-01 | 85.8% | 67.4% |
| 3h37A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.57 | 51.0 | 5.07e-01 | 96.5% | 93.8% |
| 2qwoB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.57 | 31.0 | 3.72e-01 | 78.7% | 79.3% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963005 | 316.2.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Rv2827c C-terminal domain-like › Rv2827c C-terminal domain-like | 0.81 | 58.0 | 5.81e-01 | 97.9% | 71.7% |
| 5040839 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.80 | 73.0 | 6.82e-01 | 97.2% | 88.2% |
| 4962252 | 316.1.1.41 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036 | 0.79 | 72.0 | 6.34e-01 | 96.5% | 77.5% |
| 5018203 | 316.1.1.41 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036 | 0.79 | 71.0 | 6.14e-01 | 95.7% | 74.8% |
| 1545617 | 316.1.1.33 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › APMV_polyA_pol_cat_2nd | 0.78 | 72.0 | 5.55e-01 | 98.6% | 59.1% |
| 5040978 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.78 | 72.0 | 6.23e-01 | 97.9% | 79.0% |
| 5074217 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.77 | 71.0 | 6.35e-01 | 97.2% | 86.8% |
| 3726440 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.77 | 72.0 | 6.49e-01 | 98.6% | 81.1% |
| 5027809 | 316.1.1.41 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036 | 0.77 | 72.0 | 6.08e-01 | 98.6% | 89.1% |
| 5058173 | 316.1.1.39 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF2204 | 0.77 | 71.0 | 6.13e-01 | 97.9% | 76.7% |
| 5078939 | 316.1.1.21 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Aminoglyc_resit | 0.77 | 69.0 | 6.65e-01 | 95.0% | 99.4% |
| 3633420 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.76 | 72.0 | 6.07e-01 | 100.0% | 92.3% |
| 4977130 | 316.1.1.41 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036 | 0.76 | 68.0 | 6.63e-01 | 95.0% | 98.7% |
| 4984763 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.76 | 72.0 | 6.21e-01 | 100.0% | 96.1% |
| 5030984 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.76 | 70.0 | 6.32e-01 | 97.9% | 97.3% |
| 4933931 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.76 | 70.0 | 6.58e-01 | 98.6% | 90.6% |
| 5001397 | 316.1.1.41 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036 | 0.76 | 68.0 | 5.91e-01 | 95.0% | 70.2% |
| 4968276 | 316.1.1.18 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii | 0.75 | 68.0 | 5.97e-01 | 95.7% | 69.0% |
| 4928276 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.75 | 69.0 | 5.81e-01 | 97.2% | 93.8% |
| 4974473 | 316.1.1.85 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_5 | 0.75 | 69.0 | 5.68e-01 | 98.6% | 84.1% |
| 4940185 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.75 | 60.0 | 6.24e-01 | 97.9% | 90.0% |
| 4961036 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.75 | 58.0 | 6.11e-01 | 95.0% | 90.4% |
| 3197794 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.75 | 70.0 | 6.23e-01 | 99.3% | 97.9% |
| None | — | 0.74 | 68.0 | 6.40e-01 | 97.9% | 94.0% | |
| 5078572 | 316.1.1.21 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Aminoglyc_resit | 0.74 | 67.0 | 6.62e-01 | 96.5% | 100.0% |
| 4972724 | 316.1.1.21 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Aminoglyc_resit | 0.74 | 69.0 | 6.28e-01 | 100.0% | 85.9% |
| 5079184 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.74 | 69.0 | 6.12e-01 | 100.0% | 99.0% |
| 4927191 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.74 | 68.0 | 6.47e-01 | 98.6% | 93.9% |
| 1544851 | 316.1.1.29 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Poly_A_pol_cat | 0.74 | 68.0 | 5.95e-01 | 98.6% | 77.6% |
| 4968501 | 316.1.1.18 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii | 0.74 | 68.0 | 5.70e-01 | 97.9% | 70.0% |
| 4958430 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.74 | 67.0 | 5.57e-01 | 98.6% | 96.2% |
| 4993561 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.74 | 68.0 | 6.27e-01 | 97.9% | 98.9% |
| 1348877 | 316.1.1.18 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii | 0.73 | 68.0 | 5.66e-01 | 98.6% | 90.5% |
| 1179385 | 316.1.1.7 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Pox_polyA_pol | 0.73 | 60.0 | 5.60e-01 | 87.2% | 79.8% |
| 5072250 | 316.1.1.41 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036 | 0.72 | 66.0 | 6.14e-01 | 96.5% | 84.1% |
| 6828 | 316.1.1.21 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Aminoglyc_resit | 0.72 | 67.0 | 6.44e-01 | 99.3% | 99.4% |
| 4959743 | 316.1.1.39 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF2204 | 0.72 | 66.0 | 5.89e-01 | 97.2% | 93.7% |
| 3198176 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.72 | 67.0 | 6.04e-01 | 100.0% | 97.4% |
| 4958433 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.72 | 58.0 | 6.03e-01 | 96.5% | 91.5% |
| 5080494 | 316.2.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Rv2827c C-terminal domain-like › Rv2827c C-terminal domain-like | 0.72 | 57.0 | 5.64e-01 | 92.9% | 80.0% |
| 5079837 | 316.2.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Rv2827c C-terminal domain-like › Rv2827c C-terminal domain-like | 0.71 | 51.0 | 4.87e-01 | 96.5% | 64.4% |
| 5060886 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.71 | 65.0 | 6.07e-01 | 99.3% | 98.3% |
| 5021444 | 316.1.1.21 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Aminoglyc_resit | 0.71 | 64.0 | 6.15e-01 | 96.5% | 92.5% |
| 3943586 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.71 | 56.0 | 5.92e-01 | 92.2% | 92.8% |
| 3640051 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.71 | 64.0 | 5.44e-01 | 98.6% | 95.1% |
| 3195144 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.70 | 63.0 | 5.24e-01 | 98.6% | 86.8% |
| 3638659 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.70 | 63.0 | 5.34e-01 | 98.6% | 97.9% |
| 5010136 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.70 | 64.0 | 5.79e-01 | 98.6% | 90.3% |
| 5064534 | 316.2.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Rv2827c C-terminal domain-like › Rv2827c C-terminal domain-like | 0.69 | 55.0 | 5.49e-01 | 94.3% | 82.1% |
| 3197454 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.68 | 62.0 | 5.30e-01 | 100.0% | 80.0% |
| 3606375 | 316.1.1.14 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › LicD | 0.67 | 58.0 | 4.81e-01 | 93.6% | 83.8% |
| 3281252 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 59.0 | 5.07e-01 | 98.6% | 61.4% |
| 4927756 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.65 | 54.0 | 5.63e-01 | 90.8% | 96.2% |
| 3597288 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.64 | 44.0 | 4.71e-01 | 70.9% | 98.4% |
| 5040466 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.62 | 32.0 | 4.35e-01 | 83.0% | 95.9% |
| 3204361 | 316.1.1.63 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF7582 | 0.60 | 54.0 | 4.87e-01 | 100.0% | 96.0% |
| 3387559 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.59 | 53.0 | 5.25e-01 | 96.5% | 96.6% |
| 4156614 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.58 | 52.0 | 5.30e-01 | 95.7% | 99.3% |
| 3709581 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.58 | 48.0 | 4.44e-01 | 88.7% | 81.7% |
| 4933638 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.55 | 36.0 | 3.67e-01 | 83.0% | 66.4% |
| 5020627 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.50 | 38.0 | 3.96e-01 | 80.9% | 94.8% |
D2
high
residues 155-249