Back to structures

OQ383211.1__WDS62537.1__UFRH6_110__00106

Bact-Vir

OQ383211.1__WDS62537.1__UFRH6_110__00106

Identity

Accession:
OQ383211 ↗
Kingdom:
phage

Quality

69.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-143
PDB
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 45.0 6.02e-01 74.5% 100.0%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 45.0 4.66e-01 71.6% 59.8%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 44.0 5.57e-01 73.0% 100.0%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 43.0 4.24e-01 73.0% 54.8%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 42.0 4.90e-01 72.3% 77.7%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 45.0 5.61e-01 78.7% 100.0%
2b0lC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 42.0 5.05e-01 75.9% 89.4%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 48.0 5.27e-01 80.9% 87.0%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 48.0 5.22e-01 78.0% 86.7%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 41.0 4.72e-01 73.0% 83.5%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 41.0 5.06e-01 83.7% 98.9%
3e1sA01 1.10.10.2220 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.63 40.0 4.82e-01 70.9% 95.8%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 42.0 4.51e-01 75.9% 82.5%
5deqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 33.0 4.04e-01 73.8% 95.2%
1fpqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 38.0 3.95e-01 72.3% 73.6%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.56 34.0 3.68e-01 82.3% 73.2%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.55 39.0 3.09e-01 72.3% 64.9%
2kpmA01 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.54 30.0 3.86e-01 70.2% 100.0%
1vkwA01 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.52 34.0 3.65e-01 90.1% 77.7%
1j4wA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.51 27.0 3.38e-01 83.7% 90.5%
ECOD (83)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4585912 101.1.2.603 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9 0.78 51.0 3.63e-01 78.7% 24.5%
5055444 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.78 48.0 5.67e-01 77.3% 87.0%
5054122 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.78 49.0 4.74e-01 76.6% 56.2%
4930596 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.77 52.0 4.89e-01 83.0% 57.1%
4976847 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.77 47.0 5.27e-01 75.9% 78.2%
4941287 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.76 49.0 5.94e-01 78.7% 100.0%
5029277 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.76 50.0 5.70e-01 80.1% 88.6%
5070883 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.76 48.0 5.88e-01 77.3% 98.9%
4478999 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.76 47.0 4.35e-01 74.5% 50.3%
5005582 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.75 47.0 5.12e-01 75.2% 74.2%
5016748 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.75 46.0 4.94e-01 74.5% 71.7%
3604578 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.74 48.0 5.54e-01 74.5% 87.6%
4965203 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.74 47.0 5.30e-01 75.2% 82.4%
4982081 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.74 48.0 5.30e-01 75.9% 80.0%
4950547 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.74 42.0 5.00e-01 70.9% 82.1%
5017942 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.74 41.0 4.82e-01 70.2% 77.0%
4937951 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.73 47.0 5.46e-01 75.2% 91.0%
4401786 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.72 48.0 5.45e-01 80.1% 89.5%
5010738 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.72 48.0 5.20e-01 75.9% 80.5%
4976773 101.1.2.275 alpha arrays › HTH › HTH › winged helix domain › DUF1495 0.72 41.0 4.65e-01 70.2% 72.7%
5069274 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.72 45.0 4.99e-01 75.2% 77.4%
4974447 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 45.0 4.88e-01 75.2% 74.2%
5025618 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 45.0 5.08e-01 75.2% 80.9%
5007541 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.71 46.0 5.23e-01 76.6% 86.7%
5080684 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.71 44.0 4.26e-01 74.5% 55.5%
5039984 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.71 47.0 4.42e-01 83.7% 56.4%
4982973 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.70 48.0 5.41e-01 83.7% 90.0%
5033035 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 45.0 4.92e-01 75.9% 77.1%
4986012 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.70 40.0 3.50e-01 70.2% 38.1%
4985036 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.70 46.0 4.33e-01 78.7% 54.7%
4978090 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 43.0 3.69e-01 70.9% 40.5%
4947441 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 42.0 5.31e-01 73.8% 100.0%
5018390 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 44.0 4.78e-01 75.2% 75.6%
5022036 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 45.0 4.62e-01 78.0% 68.1%
4999286 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.69 42.0 3.86e-01 71.6% 47.8%
3726854 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 43.0 5.02e-01 78.0% 88.0%
3977793 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 42.0 4.98e-01 72.3% 91.5%
4990676 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 45.0 5.07e-01 71.6% 87.3%
5025840 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 43.0 5.03e-01 73.8% 91.0%
3468223 101.1.2.90 alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.67 54.0 3.94e-01 83.7% 42.6%
4993652 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.66 54.0 4.97e-01 84.4% 99.4%
4957324 101.1.2.920 alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C 0.66 47.0 4.99e-01 82.3% 81.6%
5011468 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.66 47.0 5.02e-01 73.0% 100.0%
4943782 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 42.0 4.61e-01 73.0% 75.8%
4943395 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 51.0 4.80e-01 80.1% 99.4%
5041543 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.66 48.0 4.86e-01 89.4% 75.7%
4221024 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 48.0 4.23e-01 75.9% 98.5%
5050129 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.65 44.0 4.97e-01 71.6% 88.2%
4961841 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.65 44.0 4.59e-01 71.6% 74.6%
4970576 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.65 52.0 4.73e-01 83.0% 93.9%
5070276 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.65 41.0 4.06e-01 70.2% 61.4%
3782190 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.65 45.0 4.99e-01 70.9% 91.2%
5052491 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.65 49.0 4.41e-01 80.9% 58.4%
5028348 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.64 48.0 4.28e-01 77.3% 80.5%
4467359 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.64 49.0 4.55e-01 78.0% 98.2%
4646072 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.64 48.0 4.50e-01 77.3% 97.6%
4947925 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 49.0 4.71e-01 80.1% 100.0%
5070036 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 41.0 4.09e-01 70.2% 61.3%
4645846 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.64 48.0 4.47e-01 77.3% 97.1%
4527101 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.64 48.0 4.64e-01 78.0% 98.8%
4466102 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.64 48.0 4.46e-01 77.3% 97.1%
4438513 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.64 48.0 5.36e-01 79.4% 100.0%
4965874 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.63 47.0 4.85e-01 76.6% 89.6%
2391543 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 40.0 3.51e-01 72.3% 44.7%
4957834 101.1.2.920 alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C 0.63 45.0 4.86e-01 87.2% 86.7%
4456198 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 50.0 4.55e-01 83.0% 97.3%
5035395 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.63 47.0 4.42e-01 77.3% 95.9%
5031648 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.63 48.0 4.54e-01 78.7% 98.2%
5042462 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.63 49.0 4.67e-01 81.6% 100.0%
4507638 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.63 48.0 4.57e-01 80.1% 100.0%
4344487 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.62 48.0 4.53e-01 79.4% 100.0%
4561147 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.62 48.0 5.08e-01 80.9% 96.9%
5052844 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.62 45.0 3.93e-01 74.5% 66.8%
3330019 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.62 39.0 4.30e-01 73.0% 77.4%
5035685 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 39.0 4.14e-01 73.0% 71.0%
5061514 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 43.0 3.86e-01 71.6% 95.8%
2609 101.1.2.38 alpha arrays › HTH › HTH › winged helix domain › RTP 0.61 42.0 4.51e-01 75.9% 82.5%
5075111 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.60 48.0 4.78e-01 83.7% 100.0%
4239635 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.60 46.0 4.41e-01 80.1% 99.4%
4998031 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.60 43.0 3.99e-01 73.8% 83.2%
4927759 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.60 43.0 4.11e-01 73.8% 87.5%
4974744 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.59 44.0 4.08e-01 76.6% 93.7%
4966215 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 40.0 3.77e-01 73.0% 57.6%
D2 medium residues 256-333_345-425
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ajmB02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.54 27.0 3.01e-01 70.4% 58.6%
3ripA02 1.20.120.1900 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain 0.50 38.0 3.16e-01 77.4% 82.4%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3388013 1075.4.1.7 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › SbmA_BacA 0.65 36.0 2.76e-01 76.1% 25.3%
4994613 140.1.1.0 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.51 30.0 3.02e-01 76.1% 56.9%