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OQ401623.1__WED25041.1__CRP901_gp22__00022
Bact-VirOQ401623.1__WED25041.1__CRP901_gp22__00022
Identity
- Accession:
- OQ401623 ↗
- Kingdom:
- phage
Quality
88.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-49
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qijB03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.81 | 58.0 | 4.57e-01 | 86.7% | 38.2% |
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.65 | 53.0 | 4.21e-01 | 93.3% | 49.0% |
| 2z1cB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 49.0 | 4.38e-01 | 91.1% | 93.2% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.61 | 42.0 | 3.56e-01 | 71.1% | 68.1% |
| 1aukA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.60 | 50.0 | 3.00e-01 | 100.0% | 22.1% |
| 3gmiA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.59 | 48.0 | 3.04e-01 | 95.6% | 18.3% |
| 3ic3A01 | 3.30.2370.10 | Alpha Beta › 2-Layer Sandwich › putative pyruvate dehydrogenase fold › putative pyruvate dehydrogenase | 0.59 | 50.0 | 4.42e-01 | 100.0% | 65.6% |
| 1hp1A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.58 | 47.0 | 2.86e-01 | 95.6% | 93.0% |
| 1f32A02 | 3.30.1120.50 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Pepsin inhibitor-3 | 0.58 | 44.0 | 4.05e-01 | 91.1% | 63.3% |
| 3c0kA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 41.0 | 2.69e-01 | 84.4% | 29.0% |
| 2w5qA01 | 3.30.1120.170 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.53 | 47.0 | 3.71e-01 | 100.0% | 78.5% |
| 1vs9F02 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.52 | 37.0 | 3.36e-01 | 80.0% | 64.3% |
| 2jwkA00 | 3.30.420.270 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.52 | 39.0 | 3.48e-01 | 88.9% | 55.4% |
| 2r31A01 | 3.30.2180.10 | Alpha Beta › 2-Layer Sandwich › ATP12-like › ATP12-like | 0.51 | 38.0 | 3.43e-01 | 84.4% | 66.7% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5078825 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.88 | 58.0 | 3.46e-01 | 71.1% | 11.1% |
| 2897753 | 220.1.1.10 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SSrecog | 0.81 | 57.0 | 4.75e-01 | 91.1% | 44.2% |
| 4983508 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 45.0 | 3.86e-01 | 88.9% | 40.0% |
| 4128260 | 296.1.1.3 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 | 0.69 | 43.0 | 3.40e-01 | 75.6% | 31.1% |
| 5043309 | 3407.1.1.0 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.65 | 50.0 | 3.94e-01 | 84.4% | 70.5% |
| 3601844 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 49.0 | 3.82e-01 | 86.7% | 65.5% |
| 3454770 | 109.4.1.621 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3 | 0.64 | 49.0 | 2.96e-01 | 100.0% | 13.2% |
| 4665982 | 296.1.1.0 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 | 0.63 | 52.0 | 3.98e-01 | 91.1% | 41.0% |
| 3958912 | 296.1.1.0 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 | 0.63 | 51.0 | 3.90e-01 | 88.9% | 40.0% |
| 3381551 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.62 | 39.0 | 3.15e-01 | 86.7% | 32.9% |
| 3423399 | 5.3.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop | 0.61 | 52.0 | 4.16e-01 | 100.0% | 87.4% |
| 4958102 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.61 | 44.0 | 4.03e-01 | 80.0% | 55.4% |
| 4973040 | 3407.1.1.0 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.61 | 54.0 | 4.35e-01 | 100.0% | 90.6% |
| 3386489 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.61 | 48.0 | 3.43e-01 | 100.0% | 26.5% |
| 4979174 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.59 | 42.0 | 3.83e-01 | 75.6% | 71.7% |
| 4484289 | 633.23.1.9 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 | 0.59 | 51.0 | 3.32e-01 | 97.8% | 72.6% |
| 5055771 | 3407.1.1.0 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.58 | 52.0 | 3.78e-01 | 100.0% | 95.8% |
| 4995140 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.58 | 49.0 | 3.37e-01 | 97.8% | 29.0% |
| 3440053 | 603.1.1.146 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › TMEM62_C | 0.57 | 52.0 | 3.37e-01 | 100.0% | 61.1% |
| 4307219 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.55 | 39.0 | 3.74e-01 | 84.4% | 61.8% |
| 4972029 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.55 | 39.0 | 2.77e-01 | 86.7% | 21.2% |
| 3245161 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 40.0 | 3.29e-01 | 82.2% | 88.2% |
| 3606956 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 34.0 | 3.42e-01 | 73.3% | 64.4% |
| 5016928 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.53 | 43.0 | 2.86e-01 | 97.8% | 73.6% |
| 3928014 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 37.0 | 4.19e-01 | 88.9% | 97.1% |
| 3599019 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.51 | 37.0 | 2.91e-01 | 82.2% | 60.0% |