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OQ401623.1__WED25047.1__CRP901_gp28__00028

Bact-Vir

OQ401623.1__WED25047.1__CRP901_gp28__00028

Identity

Accession:
OQ401623 ↗
Kingdom:
phage

Quality

89.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-160
PDB
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3b79A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.73 60.0 6.47e-01 91.8% 100.0%
2j7qA00 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.73 65.0 5.56e-01 96.6% 84.0%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.71 61.0 5.58e-01 91.1% 93.1%
3mtvA02 3.90.70.70 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Arterivirus papain-like cysteine protease beta domain 0.62 41.0 4.46e-01 91.8% 78.9%
2cwsA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 40.0 3.48e-01 78.1% 67.8%
6kbyA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 41.0 3.12e-01 82.9% 74.3%
3zpyB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 38.0 3.27e-01 81.5% 66.0%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3987478 219.1.1.18 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.73 59.0 6.28e-01 91.8% 94.6%
3246337 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.73 64.0 5.71e-01 95.2% 92.2%
3947337 219.1.1.18 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.72 61.0 5.98e-01 96.6% 83.2%
3397758 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.70 62.0 5.36e-01 95.2% 90.0%
3404595 219.1.1.14 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin 0.68 60.0 5.58e-01 93.8% 90.6%
3299363 219.1.1.26 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Phytochelatin 0.67 59.0 5.16e-01 93.8% 80.0%
3450694 219.1.1.26 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Phytochelatin 0.67 58.0 5.12e-01 92.5% 81.0%
4029401 219.1.1.14 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin 0.66 59.0 5.38e-01 93.8% 87.6%
3704833 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.65 55.0 4.31e-01 91.1% 94.8%
3230955 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.63 53.0 4.44e-01 91.8% 97.3%
3608005 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.63 53.0 4.10e-01 91.8% 94.9%
4346242 219.1.1.153 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › BtrH_N 0.59 52.0 4.95e-01 97.3% 99.4%
4974472 7515.1.1.0 a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like 0.58 44.0 3.09e-01 78.8% 83.5%
3997330 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.56 48.0 3.77e-01 94.5% 75.8%
3926080 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.56 47.0 3.74e-01 91.1% 90.6%
3413860 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.56 47.0 3.57e-01 93.8% 97.3%
D2 high residues 169-242
PDB
Domain cluster: representative
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ch1A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.64 57.0 4.65e-01 100.0% 71.9%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.64 41.0 4.24e-01 79.7% 69.0%
2kwaA00 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.64 46.0 4.17e-01 77.0% 91.1%
3bc8A03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.63 54.0 4.53e-01 100.0% 89.9%
4zi6C02 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.62 53.0 3.57e-01 98.6% 35.9%
1m32A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 52.0 4.58e-01 93.2% 82.9%
1kafA00 3.90.1150.20 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain 0.62 51.0 4.59e-01 94.6% 92.6%
1vjoA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.61 54.0 4.51e-01 100.0% 72.5%
2cy8A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 52.0 3.92e-01 100.0% 56.0%
2fyxA00 3.30.70.1290 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like 0.60 41.0 3.43e-01 87.8% 40.8%
2qvpC00 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.60 52.0 3.59e-01 98.6% 93.3%
2dr1A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 52.0 4.34e-01 100.0% 71.9%
1ohvA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 50.0 3.99e-01 98.6% 56.0%
2cjgA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.59 51.0 4.11e-01 100.0% 59.1%
6zepA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.59 51.0 3.39e-01 100.0% 32.0%
1iugA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.59 52.0 4.57e-01 100.0% 84.7%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.59 50.0 4.02e-01 97.3% 85.8%
1zswA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.59 37.0 2.86e-01 77.0% 26.4%
4ritA01 3.90.1150.170 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.59 50.0 3.65e-01 98.6% 44.9%
1q7lA00 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.59 50.0 3.81e-01 100.0% 58.3%
2g9oA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 39.0 3.90e-01 90.5% 66.2%
7qh2C03 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 42.0 4.14e-01 87.8% 71.8%
3ke3A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 49.0 4.37e-01 98.6% 89.3%
3dmqA07 3.30.360.80 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › 0.58 48.0 4.82e-01 93.2% 100.0%
1lfwA03 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 40.0 3.88e-01 74.3% 100.0%
3l44A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 49.0 3.76e-01 98.6% 56.8%
4zm3B01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 48.0 4.00e-01 98.6% 70.4%
3wiwA00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.57 54.0 3.32e-01 100.0% 86.5%
1xppD00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.57 41.0 3.80e-01 78.4% 83.2%
2f7vA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.57 48.0 3.43e-01 98.6% 93.3%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.57 46.0 4.41e-01 91.9% 76.7%
3c6kA01 3.30.160.110 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain 0.57 44.0 4.16e-01 93.2% 68.1%
4nn5C02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 40.0 3.67e-01 74.3% 82.8%
1ul7A00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.57 47.0 4.26e-01 91.9% 77.5%
4e1oA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 48.0 4.47e-01 100.0% 99.0%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 36.0 3.48e-01 100.0% 55.1%
3znuA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.55 37.0 3.54e-01 78.4% 55.3%
1yj7B01 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.55 35.0 3.62e-01 91.9% 67.6%
4nhxA02 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.55 37.0 2.69e-01 71.6% 69.8%
1nw1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 41.0 3.86e-01 83.8% 96.9%
2l48A00 3.30.70.2030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 37.0 3.57e-01 86.5% 61.2%
3bpnC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 39.0 3.65e-01 77.0% 86.0%
4ns4A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 45.0 3.13e-01 97.3% 97.0%
2xrnA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.53 40.0 3.10e-01 83.8% 35.6%
1fhoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 37.0 3.24e-01 75.7% 77.3%
2rl8A00 2.70.130.10 Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain 0.52 38.0 3.13e-01 78.4% 67.6%
1jv2B04 4.10.1240.30 Few Secondary Structures › Irregular › Hormone receptor fold › 0.52 32.0 3.06e-01 70.3% 50.0%
2laeA00 3.30.310.170 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Outer membrane protein assembly factor BamC 0.52 42.0 3.71e-01 91.9% 78.0%
4da5A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 37.0 3.59e-01 74.3% 90.4%
3obfA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.52 42.0 3.19e-01 87.8% 38.6%
2faoA01 3.90.920.10 Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain 0.52 45.0 3.03e-01 97.3% 55.7%
3tf8B00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.52 36.0 2.81e-01 74.3% 48.9%
4fdtB00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.52 39.0 2.54e-01 83.8% 30.1%
1kvkA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.51 34.0 2.83e-01 98.6% 35.1%
2v95A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 33.0 2.84e-01 71.6% 38.0%
1q7sA00 3.40.1490.10 Alpha Beta › 3-Layer(aba) Sandwich › Bit1 › Bit1 0.51 35.0 3.12e-01 89.2% 47.0%
2wqlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 41.0 3.32e-01 91.9% 83.6%
1e8oD00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.50 33.0 3.34e-01 79.7% 65.8%
1dn0D02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 36.0 3.33e-01 75.7% 88.3%
4huzA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.50 38.0 3.04e-01 82.4% 43.7%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3193851 3561.1.1.1 a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Med17 0.72 64.0 3.95e-01 100.0% 49.7%
3731495 330.1.1.3 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer 0.66 59.0 5.34e-01 100.0% 97.0%
2996190 3016.1.1.13 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SepSecS 0.66 58.0 4.63e-01 100.0% 79.6%
4453707 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.66 56.0 4.08e-01 98.6% 57.7%
5012656 330.5.1.0 a+b two layers › dsRBD-like › Bacillus phage protein › Bacillus phage protein 0.66 55.0 5.27e-01 93.2% 88.2%
3811901 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.65 54.0 5.72e-01 89.2% 100.0%
3718301 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.65 59.0 5.38e-01 98.6% 88.4%
5046913 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.65 55.0 4.99e-01 95.9% 95.1%
3519958 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.65 46.0 4.71e-01 83.8% 78.6%
4942580 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.64 52.0 5.05e-01 90.5% 95.3%
4236828 331.22.1.2 a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 0.64 57.0 4.18e-01 98.6% 75.4%
4505049 3016.1.1.2 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 0.64 54.0 4.98e-01 94.6% 96.8%
3710326 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.64 57.0 5.47e-01 100.0% 95.3%
4997832 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.64 46.0 3.09e-01 77.0% 29.2%
3961733 330.10.1.0 a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain 0.63 55.0 5.22e-01 98.6% 90.0%
4998291 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.62 54.0 4.97e-01 100.0% 95.9%
5074227 873.1.1.20 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › DUF6125 0.61 44.0 3.52e-01 77.0% 63.0%
3271533 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.61 52.0 4.58e-01 93.2% 80.6%
3477584 2011.1.1.6 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 0.60 52.0 3.49e-01 100.0% 36.6%
4939731 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.60 45.0 4.75e-01 90.5% 92.3%
3475404 2011.1.1.6 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 0.60 52.0 3.88e-01 100.0% 56.5%
3168452 331.10.2.3 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › Med1 0.59 50.0 4.54e-01 100.0% 100.0%
5059099 241.2.1.0 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.59 50.0 4.77e-01 98.6% 96.6%
4341414 2011.1.1.21 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Gaa1 0.58 50.0 3.38e-01 100.0% 26.3%
4346250 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.58 49.0 4.09e-01 98.6% 93.6%
3870867 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.58 48.0 4.12e-01 91.9% 64.2%
5083024 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 50.0 3.20e-01 100.0% 68.1%
4611007 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.57 48.0 4.15e-01 91.9% 82.5%
3702931 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.57 48.0 3.79e-01 94.6% 53.1%
3165990 310.3.1.22 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PF27480, PF30181 0.57 41.0 3.66e-01 78.4% 74.8%
5065204 2011.1.1.6 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 0.57 48.0 3.35e-01 100.0% 39.6%
1806521 331.3.1.50 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PF29358 0.57 46.0 3.99e-01 93.2% 100.0%
5072113 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.57 41.0 3.59e-01 78.4% 69.7%
3670918 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.57 49.0 3.18e-01 98.6% 92.7%
3327504 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.57 49.0 3.27e-01 100.0% 90.6%
5074419 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.56 43.0 4.50e-01 91.9% 96.9%
4962510 2011.1.1.6 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 0.56 48.0 3.33e-01 100.0% 39.3%
4134794 2011.1.1.6 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 0.56 47.0 3.35e-01 100.0% 41.1%
5028016 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.56 38.0 3.95e-01 83.8% 75.7%
3948351 310.3.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › T2SSM 0.56 43.0 3.72e-01 81.1% 72.7%
3814009 7579.1.1.92 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1, Abhydrolase_6 0.56 48.0 3.22e-01 98.6% 95.7%
3804758 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.55 48.0 3.17e-01 98.6% 90.9%
5051686 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.55 41.0 3.42e-01 79.7% 71.6%
4982249 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.55 45.0 4.20e-01 91.9% 83.2%
3188702 7579.1.1.53 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Say1_Mug180 0.55 46.0 2.90e-01 93.2% 22.2%
4017229 7579.1.1.36 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 0.55 46.0 2.99e-01 95.9% 18.9%
3615642 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.55 43.0 4.52e-01 85.1% 96.9%
3931157 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.55 41.0 4.31e-01 79.7% 95.4%
4943140 2011.1.1.23 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › M20_dimer 0.55 46.0 3.32e-01 100.0% 94.9%
4950750 2011.1.1.6 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 0.55 46.0 3.31e-01 100.0% 43.5%
4167707 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.54 47.0 3.17e-01 98.6% 95.0%
5077099 2011.1.1.6 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 0.54 46.0 3.21e-01 100.0% 39.3%
3839295 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.54 38.0 3.98e-01 74.3% 95.7%
3739321 216.1.1.2 a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.54 45.0 3.49e-01 95.9% 97.2%
3387953 304.162.1.0 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain 0.54 37.0 3.85e-01 83.8% 75.7%
5062234 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.54 44.0 3.85e-01 93.2% 70.0%
4979757 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.54 44.0 3.51e-01 90.5% 79.2%
4958522 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.54 38.0 3.93e-01 86.5% 84.6%
3291523 2011.1.1.6 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 0.54 45.0 3.14e-01 100.0% 37.2%
4094504 309.1.2.0 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain 0.54 38.0 3.19e-01 75.7% 85.9%
3280378 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.53 44.0 3.38e-01 89.2% 63.6%
4995145 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.53 42.0 4.04e-01 91.9% 75.3%
5004346 331.19.1.0 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains 0.53 44.0 4.24e-01 91.9% 85.9%
3290094 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.52 39.0 3.30e-01 83.8% 46.2%
4977467 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.52 42.0 3.82e-01 91.9% 81.9%
3286312 642.1.1.1 a+b three layers › Suppressor of Fused, N-terminal domain › Suppressor of Fused, N-terminal domain › Suppressor of Fused, N-terminal domain › SUFU 0.52 41.0 3.13e-01 89.2% 71.6%
3513019 2011.1.1.6 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 0.52 44.0 3.18e-01 98.6% 91.2%
3956067 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.51 37.0 3.28e-01 83.8% 49.2%
4399119 331.3.1.8 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Lipoprotein_18 0.51 43.0 3.73e-01 95.9% 81.7%
3457354 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.51 38.0 3.11e-01 81.1% 52.4%
3733617 3435.1.1.0 a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.50 40.0 2.80e-01 91.9% 31.0%
4281419 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.50 38.0 3.12e-01 81.1% 54.3%
3709607 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.50 38.0 2.87e-01 79.7% 47.4%