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OQ401623.1__WED25089.1__CRP901_gp70__00070
Bact-VirOQ401623.1__WED25089.1__CRP901_gp70__00070
Identity
- Accession:
- OQ401623 ↗
- Kingdom:
- phage
Quality
62.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-52
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3thxB02 | 3.30.420.110 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain | 0.75 | 58.0 | 4.10e-01 | 98.0% | 28.3% |
| 2mh3A00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.72 | 58.0 | 5.21e-01 | 90.0% | 65.7% |
| 2cwoA02 | 1.10.1200.170 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › RNA silencing suppressor P21, C-terminal domain | 0.72 | 59.0 | 5.05e-01 | 94.0% | 61.4% |
| 3b0dB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.68 | 51.0 | 4.15e-01 | 100.0% | 43.2% |
| 3b0bB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.64 | 53.0 | 4.32e-01 | 100.0% | 48.5% |
| 4cfsA02 | 1.10.210.20 | Mainly Alpha › Orthogonal Bundle › Uteroglobin › | 0.64 | 54.0 | 4.90e-01 | 98.0% | 90.0% |
| 2p1aB01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.63 | 53.0 | 3.90e-01 | 100.0% | 58.9% |
| 3nbiA01 | 1.10.8.1020 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain | 0.62 | 45.0 | 4.37e-01 | 90.0% | 67.2% |
| 2j1oA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.61 | 48.0 | 3.03e-01 | 86.0% | 30.6% |
| 4mycA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.60 | 43.0 | 2.66e-01 | 78.0% | 11.9% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.60 | 48.0 | 3.96e-01 | 100.0% | 49.4% |
| 2v40A02 | 1.10.300.10 | Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 | 0.59 | 42.0 | 3.56e-01 | 78.0% | 44.3% |
| 2btoA01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.57 | 49.0 | 3.13e-01 | 100.0% | 41.6% |
| 1oizA01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.57 | 43.0 | 3.92e-01 | 86.0% | 70.8% |
| 4g6dB02 | 6.10.140.1800 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 44.0 | 3.91e-01 | 92.0% | 56.8% |
| 4uqfG01 | 1.10.286.10 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain | 0.55 | 45.0 | 4.54e-01 | 100.0% | 92.3% |
| 4mndA02 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.53 | 45.0 | 3.12e-01 | 100.0% | 51.8% |
| 4jneA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.53 | 43.0 | 3.68e-01 | 98.0% | 55.7% |
| 1gvfB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 43.0 | 2.76e-01 | 100.0% | 88.7% |
| 2ft0A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 43.0 | 2.77e-01 | 92.0% | 53.2% |
| 1yeyA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.51 | 41.0 | 2.51e-01 | 88.0% | 69.7% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4093695 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.73 | 60.0 | 4.32e-01 | 98.0% | 31.3% |
| 4310656 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.73 | 57.0 | 4.04e-01 | 98.0% | 27.5% |
| 4046499 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.71 | 58.0 | 4.17e-01 | 98.0% | 30.3% |
| 4476959 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 57.0 | 3.17e-01 | 98.0% | 6.4% |
| 4577571 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.70 | 57.0 | 4.08e-01 | 100.0% | 29.4% |
| 4134120 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.69 | 59.0 | 4.17e-01 | 100.0% | 31.9% |
| 3801023 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.67 | 58.0 | 5.02e-01 | 100.0% | 85.0% |
| 3256889 | 148.1.1.18 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CENP-S | 0.66 | 54.0 | 4.24e-01 | 100.0% | 41.8% |
| 4610257 | 6130.1.1.0 ↗ | alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain | 0.64 | 57.0 | 5.18e-01 | 98.0% | 87.7% |
| 4014878 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 44.0 | 2.63e-01 | 72.0% | 69.4% |
| 3264036 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.63 | 54.0 | 4.27e-01 | 98.0% | 57.1% |
| 3507969 | 3755.3.1.420 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PTHB1_hp | 0.62 | 54.0 | 3.72e-01 | 100.0% | 49.1% |
| 4679620 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.60 | 53.0 | 3.59e-01 | 100.0% | 28.0% |
| 3477366 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.59 | 48.0 | 3.67e-01 | 92.0% | 61.7% |
| 3919361 | 193.1.1.1 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH | 0.58 | 45.0 | 3.86e-01 | 86.0% | 60.0% |
| 2443966 | 2485.3.1.1 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_cap_E | 0.58 | 45.0 | 2.72e-01 | 94.0% | 19.1% |
| 1681684 | 244.1.1.9 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GMC_oxred_C | 0.57 | 44.0 | 3.01e-01 | 100.0% | 22.2% |
| 3941081 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 37.0 | 3.47e-01 | 100.0% | 56.9% |