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OQ401623.1__WED25091.1__CRP901_gp72__00072
Bact-VirOQ401623.1__WED25091.1__CRP901_gp72__00072
Identity
- Accession:
- OQ401623 ↗
- Kingdom:
- phage
Quality
45.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 161-204
Domain cluster:
rep: IMGVR_UViG_3300029305_005928-3300029305-Ga0307249_101033452__D259-301
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01476.27 best | LysM | 44.2 | 2.00e-11 | 97.7% | 93.0% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5c8qB02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.94 | 85.0 | 8.39e-01 | 100.0% | 93.5% |
| 4b8vA01 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.94 | 84.0 | 7.19e-01 | 100.0% | 64.2% |
| 4b8vA02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.92 | 83.0 | 6.95e-01 | 100.0% | 60.3% |
| 4b8vA03 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.85 | 73.0 | 7.08e-01 | 100.0% | 87.8% |
| 2mtzA01 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.82 | 68.0 | 6.57e-01 | 100.0% | 84.0% |
| 2djpA00 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.79 | 67.0 | 5.62e-01 | 100.0% | 55.8% |
| 6xiuA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 58.0 | 4.46e-01 | 93.2% | 48.5% |
| 3mklA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 58.0 | 4.43e-01 | 93.2% | 47.1% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 63.0 | 4.94e-01 | 100.0% | 53.4% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 52.0 | 4.48e-01 | 95.5% | 69.4% |
| 3edpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 47.0 | 4.08e-01 | 93.2% | 73.7% |
| 2kpjA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.55 | 49.0 | 4.21e-01 | 100.0% | 78.6% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3985839 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.98 | 88.0 | 7.29e-01 | 100.0% | 60.0% |
| 3969916 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.98 | 88.0 | 7.29e-01 | 100.0% | 60.0% |
| 4249176 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.97 | 87.0 | 7.69e-01 | 100.0% | 70.0% |
| 3974521 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.97 | 87.0 | 7.69e-01 | 100.0% | 70.0% |
| 3464064 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.97 | 87.0 | 6.74e-01 | 100.0% | 49.4% |
| 3381619 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.97 | 86.0 | 5.06e-01 | 100.0% | 14.3% |
| 3838194 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.96 | 86.0 | 8.60e-01 | 100.0% | 93.3% |
| 4448562 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.96 | 86.0 | 7.86e-01 | 100.0% | 76.4% |
| 2035755 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.96 | 86.0 | 6.35e-01 | 100.0% | 42.4% |
| 4205026 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.96 | 86.0 | 7.35e-01 | 100.0% | 64.6% |
| 3337328 | 101.15.1.14 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 | 0.96 | 86.0 | 5.04e-01 | 100.0% | 14.8% |
| 3655335 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.96 | 85.0 | 5.53e-01 | 100.0% | 25.5% |
| 3452845 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.96 | 85.0 | 7.81e-01 | 100.0% | 76.4% |
| 3898121 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.96 | 85.0 | 7.80e-01 | 100.0% | 76.4% |
| 4404011 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.96 | 85.0 | 7.09e-01 | 100.0% | 60.0% |
| 3165082 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.95 | 86.0 | 8.23e-01 | 100.0% | 86.0% |
| 4118675 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.95 | 84.0 | 8.41e-01 | 100.0% | 93.3% |
| 2047861 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.95 | 86.0 | 7.75e-01 | 100.0% | 74.1% |
| 3190144 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.95 | 86.0 | 8.27e-01 | 100.0% | 87.8% |
| 3165071 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.95 | 84.0 | 7.74e-01 | 100.0% | 76.4% |
| 3417561 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.95 | 86.0 | 5.02e-01 | 100.0% | 14.6% |
| 2124917 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.95 | 85.0 | 5.59e-01 | 100.0% | 26.7% |
| 3458171 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.95 | 85.0 | 7.37e-01 | 100.0% | 66.2% |
| 3963287 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.95 | 80.0 | 8.37e-01 | 95.5% | 100.0% |
| 3426433 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.95 | 85.0 | 7.58e-01 | 100.0% | 71.7% |
| 4277578 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.94 | 84.0 | 8.07e-01 | 100.0% | 86.0% |
| 3636417 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.94 | 85.0 | 7.98e-01 | 100.0% | 84.9% |
| 3337080 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.93 | 83.0 | 7.41e-01 | 100.0% | 71.7% |
| 3234671 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.93 | 83.0 | 7.69e-01 | 100.0% | 78.2% |
| 3981327 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.93 | 84.0 | 7.78e-01 | 100.0% | 79.6% |
| 3903953 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.93 | 79.0 | 7.58e-01 | 100.0% | 82.0% |
| 3324708 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.92 | 82.0 | 7.32e-01 | 100.0% | 71.7% |
| 2074716 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.92 | 83.0 | 7.85e-01 | 100.0% | 84.3% |
| 4022922 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.92 | 83.0 | 7.62e-01 | 100.0% | 78.2% |
| 3303205 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.92 | 85.0 | 7.56e-01 | 100.0% | 75.0% |
| 3636424 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.92 | 85.0 | 7.81e-01 | 100.0% | 81.8% |
| 3349612 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.92 | 79.0 | 7.58e-01 | 100.0% | 82.0% |
| 4500818 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.92 | 84.0 | 7.92e-01 | 100.0% | 86.5% |
| 2124476 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.92 | 83.0 | 5.75e-01 | 100.0% | 32.6% |
| 3670445 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.92 | 85.0 | 4.94e-01 | 100.0% | 14.8% |
| 4157099 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.92 | 83.0 | 8.06e-01 | 100.0% | 89.6% |
| 4137479 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.91 | 82.0 | 6.43e-01 | 100.0% | 50.6% |
| 3186012 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.91 | 83.0 | 7.44e-01 | 100.0% | 76.7% |
| 4379136 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.91 | 83.0 | 5.96e-01 | 100.0% | 39.1% |
| 3182365 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.90 | 80.0 | 7.48e-01 | 100.0% | 81.1% |
| 3964920 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.90 | 76.0 | 6.91e-01 | 100.0% | 70.7% |
| 3691758 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.90 | 82.0 | 7.55e-01 | 100.0% | 81.8% |
| 3191020 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.90 | 81.0 | 7.28e-01 | 100.0% | 78.3% |
| 4149501 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.90 | 80.0 | 7.66e-01 | 100.0% | 86.0% |
| 4023232 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.90 | 81.0 | 7.23e-01 | 100.0% | 75.0% |
| 3711427 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.89 | 75.0 | 6.43e-01 | 100.0% | 59.4% |
| 3413357 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.89 | 80.0 | 6.71e-01 | 100.0% | 61.4% |
| 1758716 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.89 | 78.0 | 7.42e-01 | 100.0% | 82.7% |
| 3946658 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.89 | 80.0 | 6.80e-01 | 100.0% | 62.9% |
| 4662825 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.89 | 79.0 | 6.92e-01 | 100.0% | 69.2% |
| 4492966 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.88 | 77.0 | 7.15e-01 | 100.0% | 78.2% |
| 3604763 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.88 | 74.0 | 5.89e-01 | 100.0% | 48.2% |
| 3190118 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.88 | 79.0 | 7.60e-01 | 100.0% | 90.0% |
| 3810505 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.88 | 77.0 | 5.08e-01 | 100.0% | 26.1% |
| 3185732 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.88 | 77.0 | 7.19e-01 | 100.0% | 89.1% |
| 3517460 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.88 | 77.0 | 7.18e-01 | 100.0% | 78.2% |
| 3925474 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.87 | 77.0 | 7.43e-01 | 100.0% | 86.0% |
| 3970704 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.87 | 75.0 | 6.63e-01 | 100.0% | 66.2% |
| 3846469 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.87 | 77.0 | 6.00e-01 | 100.0% | 47.8% |
| 3989756 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.87 | 77.0 | 7.52e-01 | 100.0% | 95.8% |
| 3679146 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.87 | 76.0 | 5.45e-01 | 100.0% | 36.0% |
| 3821115 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.87 | 78.0 | 6.20e-01 | 100.0% | 51.8% |
| 4128043 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.87 | 74.0 | 7.44e-01 | 100.0% | 95.6% |
| 3320955 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.87 | 76.0 | 6.63e-01 | 100.0% | 66.2% |
| 3338947 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.87 | 77.0 | 6.74e-01 | 100.0% | 67.7% |
| 3698670 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.87 | 73.0 | 6.56e-01 | 100.0% | 68.3% |
| 3240624 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 74.0 | 6.94e-01 | 100.0% | 78.2% |
| 3365578 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.86 | 77.0 | 6.27e-01 | 100.0% | 61.3% |
| 3248434 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 76.0 | 7.39e-01 | 100.0% | 91.8% |
| 3232962 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.85 | 75.0 | 6.73e-01 | 100.0% | 71.7% |
| 2042916 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.85 | 73.0 | 6.85e-01 | 100.0% | 79.6% |
| 3716764 | 101.15.1.12 ↗ | alpha arrays › HTH › LysM domain › LysM domain › PF30403 | 0.85 | 76.0 | 6.81e-01 | 100.0% | 81.7% |
| 3595402 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.85 | 69.0 | 6.87e-01 | 88.6% | 93.3% |
| 3611431 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.85 | 75.0 | 6.74e-01 | 100.0% | 81.7% |
| 3367888 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.84 | 75.0 | 6.37e-01 | 100.0% | 68.6% |
| 4678697 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.84 | 73.0 | 7.08e-01 | 100.0% | 98.0% |
| 2644066 | 101.15.1.7 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM_RLK | 0.84 | 69.0 | 5.76e-01 | 100.0% | 53.9% |
| 3306283 | 101.15.1.8 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_NFP | 0.83 | 71.0 | 6.25e-01 | 100.0% | 66.2% |
| 3190345 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 73.0 | 6.82e-01 | 100.0% | 80.0% |
| 1759182 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 69.0 | 6.68e-01 | 100.0% | 84.3% |
| 4008890 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.81 | 70.0 | 6.55e-01 | 100.0% | 85.5% |
| 3838186 | 101.15.1.12 ↗ | alpha arrays › HTH › LysM domain › LysM domain › PF30403 | 0.79 | 68.0 | 5.66e-01 | 100.0% | 57.5% |
| 162111 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 67.0 | 5.62e-01 | 100.0% | 55.8% |
| 3457416 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 68.0 | 6.16e-01 | 100.0% | 71.7% |
| 4015813 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.78 | 66.0 | 6.07e-01 | 100.0% | 73.3% |
| 4007855 | 101.15.1.12 ↗ | alpha arrays › HTH › LysM domain › LysM domain › PF30403 | 0.77 | 66.0 | 5.38e-01 | 100.0% | 52.9% |
| 3189252 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 65.0 | 5.84e-01 | 100.0% | 67.7% |
| 3267280 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.76 | 64.0 | 6.23e-01 | 100.0% | 88.0% |
| 4292036 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.74 | 62.0 | 5.70e-01 | 97.7% | 86.7% |
| 4447894 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.74 | 62.0 | 5.81e-01 | 97.7% | 92.7% |
| 3964919 | 101.15.1.12 ↗ | alpha arrays › HTH › LysM domain › LysM domain › PF30403 | 0.72 | 59.0 | 5.27e-01 | 100.0% | 64.3% |
| 3969915 | 101.15.1.12 ↗ | alpha arrays › HTH › LysM domain › LysM domain › PF30403 | 0.72 | 59.0 | 5.24e-01 | 100.0% | 62.9% |
| 4352200 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.71 | 58.0 | 5.09e-01 | 95.5% | 65.7% |
| 3516812 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.71 | 61.0 | 5.43e-01 | 97.7% | 80.0% |
D2
high
residues 759-855
D3
medium
residues 605-670