←Back to structures
OQ401624.1__WED25168.1__CRP902_gp72__00072
Bact-VirOQ401624.1__WED25168.1__CRP902_gp72__00072
Identity
- Accession:
- OQ401624 ↗
- Kingdom:
- phage
Quality
91.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-100
Domain cluster:
representative
D2
high
residues 110-138_174-216_321-425
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qdnA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.64 | 30.0 | 3.74e-01 | 94.4% | 69.0% |
| 2l57A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.63 | 30.0 | 3.50e-01 | 93.8% | 61.1% |
| 1w4vA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.62 | 30.0 | 3.72e-01 | 93.8% | 72.7% |
| 1x5eA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.62 | 29.0 | 3.62e-01 | 93.8% | 70.6% |
| 4cw9B00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 29.0 | 3.66e-01 | 93.8% | 74.0% |
| 5gu7C01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.60 | 31.0 | 3.60e-01 | 93.8% | 68.3% |
| 5j7dC00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.60 | 30.0 | 3.70e-01 | 93.8% | 75.5% |
| 2ljaA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.60 | 36.0 | 3.83e-01 | 93.8% | 66.4% |
| 3hdcA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.59 | 34.0 | 3.90e-01 | 93.8% | 75.8% |
| 1nw2A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.59 | 29.0 | 3.57e-01 | 93.8% | 74.3% |
| 6vbkA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.59 | 37.0 | 4.53e-01 | 91.5% | 100.0% |
| 3vfiA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.59 | 29.0 | 3.60e-01 | 93.8% | 76.0% |
| 3kcmF00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 34.0 | 3.83e-01 | 93.8% | 73.2% |
| 1e2yF00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 38.0 | 3.94e-01 | 93.8% | 70.2% |
| 4tveA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 29.0 | 3.50e-01 | 93.8% | 70.1% |
| 4grfA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 35.0 | 3.88e-01 | 93.8% | 73.6% |
| 1kngA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 34.0 | 3.69e-01 | 93.8% | 68.1% |
| 1n8jA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 36.0 | 3.63e-01 | 93.8% | 59.1% |
| 3me8B00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 37.0 | 3.99e-01 | 93.8% | 73.7% |
| 3lwaA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 35.0 | 3.76e-01 | 93.8% | 69.5% |
| 2m72A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 35.0 | 3.74e-01 | 93.8% | 69.3% |
| 3gkmA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 36.0 | 3.82e-01 | 93.8% | 71.3% |
| 1z5yE00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 33.0 | 3.67e-01 | 94.4% | 72.1% |
| 6p0wA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 34.0 | 3.85e-01 | 93.8% | 78.5% |
| 1a8lA02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 25.0 | 3.14e-01 | 88.1% | 67.0% |
| 1urmA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 36.0 | 3.77e-01 | 93.8% | 72.2% |
| 4dsqA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 36.0 | 3.64e-01 | 93.8% | 67.2% |
| 2b7jB01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 38.0 | 3.90e-01 | 93.8% | 76.0% |
| 1gp1A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 40.0 | 4.04e-01 | 93.8% | 80.4% |
| 4o89A02 | 3.30.360.20 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › RNA 3'-terminal phosphate cyclase, insert domain | 0.51 | 21.0 | 2.75e-01 | 88.1% | 64.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4945621 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.64 | 30.0 | 3.86e-01 | 93.8% | 75.2% |
| 4253746 | 2485.1.1.31 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Redoxin | 0.60 | 35.0 | 3.74e-01 | 93.8% | 63.2% |
| 4600889 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.58 | 34.0 | 3.66e-01 | 93.8% | 65.3% |
| 3498670 | 2485.1.1.21 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › TXD17-like_Trx | 0.58 | 31.0 | 3.80e-01 | 93.2% | 80.0% |
| 3398794 | 2485.1.1.21 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › TXD17-like_Trx | 0.57 | 31.0 | 3.56e-01 | 93.2% | 68.9% |
| 3503521 | 2485.1.1.21 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › TXD17-like_Trx | 0.57 | 31.0 | 3.75e-01 | 92.7% | 79.1% |
| 4969667 | 2485.2.1.1 ↗ | a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert | 0.57 | 25.0 | 3.14e-01 | 89.8% | 66.7% |
| 4547724 | 2485.1.1.31 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Redoxin | 0.54 | 34.0 | 3.60e-01 | 93.8% | 69.2% |
| 4487352 | 2485.1.1.31 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Redoxin | 0.54 | 36.0 | 3.71e-01 | 93.8% | 69.7% |
| 5061896 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.53 | 27.0 | 3.14e-01 | 88.1% | 66.4% |
| 3421625 | 292.1.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Ribosome inactivating proteins (RIP) › Ribosome inactivating proteins (RIP) › RIP | 0.52 | 34.0 | 3.05e-01 | 94.4% | 44.6% |
D3
high
residues 219-315
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7dniB01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.61 | 50.0 | 5.18e-01 | 91.8% | 100.0% |
| 2nsfA01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.61 | 50.0 | 4.28e-01 | 90.7% | 98.1% |
| 4akfA01 | 3.40.1090.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytosolic phospholipase A2 catalytic domain › Cytosolic phospholipase A2 catalytic domain | 0.59 | 51.0 | 3.57e-01 | 100.0% | 50.6% |
| 1gcvB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 44.0 | 3.99e-01 | 87.6% | 87.5% |
| 3hyuA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 45.0 | 4.02e-01 | 90.7% | 91.5% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.55 | 34.0 | 3.70e-01 | 77.3% | 74.1% |
| 2cfoA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.54 | 29.0 | 3.56e-01 | 84.5% | 88.9% |
| 1wdhA02 | 1.10.720.60 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.53 | 45.0 | 4.51e-01 | 99.0% | 93.1% |
| 1b10A00 | 1.10.790.10 | Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain | 0.50 | 35.0 | 3.44e-01 | 72.2% | 90.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3905947 | 110.1.1.11 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › HSR | 0.72 | 64.0 | 6.16e-01 | 97.9% | 94.5% |
| 3907058 | 110.1.1.2 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD | 0.72 | 62.0 | 6.13e-01 | 93.8% | 94.0% |
| 3899681 | 110.1.1.2 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD | 0.69 | 59.0 | 5.82e-01 | 93.8% | 89.5% |
| 4402145 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.63 | 48.0 | 3.99e-01 | 82.5% | 80.6% |
| 4954713 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.61 | 44.0 | 4.18e-01 | 77.3% | 89.2% |
| 3803646 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.58 | 33.0 | 3.88e-01 | 80.4% | 83.1% |
| 4933950 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.57 | 44.0 | 3.46e-01 | 84.5% | 63.6% |
| 3864182 | 3736.1.1.0 ↗ | alpha superhelices › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 | 0.56 | 32.0 | 3.30e-01 | 90.7% | 58.9% |
| 3364960 | 108.1.1.14 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF_assoc_2 | 0.54 | 45.0 | 4.13e-01 | 92.8% | 87.7% |
| 5055289 | 309.1.1.15 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › DEAD_assoc | 0.54 | 43.0 | 3.57e-01 | 89.7% | 82.6% |
| 3489734 | 197.1.1.0 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like | 0.52 | 39.0 | 4.15e-01 | 80.4% | 100.0% |
| 4125089 | 4044.1.1.1 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane | 0.52 | 44.0 | 4.04e-01 | 97.9% | 81.5% |
| 3973045 | 5051.1.1.0 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like | 0.51 | 41.0 | 2.62e-01 | 91.8% | 79.7% |
| 5024277 | 1079.1.1.19 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › DUF2162 | 0.51 | 36.0 | 2.86e-01 | 73.2% | 75.0% |
| 3478654 | 3567.1.1.103 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › PBC | 0.50 | 39.0 | 3.57e-01 | 83.5% | 74.6% |