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OQ411014.1__WEM33091.1__EJP02_030__00030
Bact-VirOQ411014.1__WEM33091.1__EJP02_030__00030
Identity
- Accession:
- OQ411014 ↗
- Kingdom:
- phage
Quality
86.6
mean pLDDT
Taxonomy
TaxID: 3028122
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-23_72-137
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1neiA00 | 3.30.160.220 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YoaG | 0.72 | 26.0 | 3.18e-01 | 100.0% | 50.0% |
| 6ruiB04 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.63 | 44.0 | 3.56e-01 | 74.2% | 98.9% |
| 5dikA00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.57 | 40.0 | 3.74e-01 | 74.2% | 100.0% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.55 | 46.0 | 3.11e-01 | 95.5% | 47.9% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.54 | 34.0 | 3.14e-01 | 100.0% | 49.1% |
| 7nmqA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.54 | 44.0 | 3.07e-01 | 93.3% | 76.9% |
| 4i5tB00 | 3.30.428.70 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › ATP adenylyltransferase | 0.53 | 44.0 | 3.07e-01 | 92.1% | 47.9% |
| 1x7vA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 31.0 | 3.07e-01 | 100.0% | 53.1% |
| 6l2cB00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.52 | 46.0 | 3.00e-01 | 98.9% | 48.9% |
| 4jz6A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 42.0 | 3.11e-01 | 93.3% | 76.3% |
| 2pn2A00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.50 | 35.0 | 3.05e-01 | 98.9% | 47.4% |
| 2wj9B00 | 3.30.70.3580 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Antirestriction protein | 0.50 | 37.0 | 3.24e-01 | 80.9% | 86.9% |
| 4oa3A00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.50 | 35.0 | 2.99e-01 | 100.0% | 45.4% |
| 7mi4A01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.50 | 36.0 | 2.80e-01 | 74.2% | 83.1% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963172 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 31.0 | 2.58e-01 | 96.6% | 29.3% |
| 3946510 | 803.1.1.0 ↗ | a+b duplicates or obligate multimers › Hypothetical protein YoaG › Hypothetical protein YoaG › Hypothetical protein YoaG | 0.58 | 29.0 | 4.00e-01 | 91.0% | 97.8% |
| 3506749 | 633.21.1.23 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 | 0.58 | 42.0 | 3.43e-01 | 76.4% | 92.7% |
| 3515089 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.56 | 29.0 | 3.27e-01 | 100.0% | 61.8% |
| 3955219 | 633.23.1.16 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Trp_oprn_chp | 0.55 | 40.0 | 3.29e-01 | 76.4% | 95.2% |
| 4096474 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.54 | 27.0 | 3.25e-01 | 80.9% | 78.0% |
| 3419156 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.54 | 46.0 | 3.10e-01 | 94.4% | 89.0% |
| 4030581 | 2498.5.1.1 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like › Cpn60_TCP1 | 0.52 | 46.0 | 3.08e-01 | 100.0% | 54.3% |
| 4507562 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.52 | 26.0 | 3.18e-01 | 85.4% | 74.5% |
| 4304389 | 5086.1.1.119 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › RRG1_C | 0.52 | 36.0 | 2.79e-01 | 74.2% | 30.9% |
| 1548765 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.51 | 33.0 | 3.20e-01 | 89.9% | 57.8% |
| 3979806 | 3822.1.1.1 ↗ | alpha complex topology › Intergenic-region protein › Intergenic-region protein › Intergenic-region protein › Antirestrict | 0.51 | 35.0 | 3.03e-01 | 70.8% | 84.7% |
| 3593339 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.51 | 31.0 | 2.87e-01 | 70.8% | 45.2% |
| 4148130 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.51 | 27.0 | 3.22e-01 | 82.0% | 80.0% |
| 5029306 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.51 | 42.0 | 2.81e-01 | 93.3% | 93.1% |
| 3220364 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.50 | 43.0 | 3.35e-01 | 95.5% | 58.0% |
| 3964249 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.50 | 30.0 | 3.46e-01 | 93.3% | 88.3% |
D2
medium
residues 24-71_138-157
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4o1sA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.62 | 46.0 | 3.45e-01 | 79.4% | 74.1% |
| 3wa5B00 | 2.60.120.1690 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 52.0 | 4.26e-01 | 92.6% | 92.7% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.61 | 37.0 | 3.73e-01 | 80.9% | 59.4% |
| 1y13A00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.61 | 42.0 | 3.15e-01 | 100.0% | 30.1% |
| 3kxeA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.58 | 36.0 | 3.21e-01 | 95.6% | 45.7% |
| 3cxbA01 | 3.30.2440.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein SifA fold › Secreted effector protein SifA | 0.57 | 42.0 | 3.50e-01 | 77.9% | 49.6% |
| 4bv4R00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.56 | 47.0 | 2.88e-01 | 94.1% | 15.0% |
| 1jyaB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 38.0 | 3.18e-01 | 72.1% | 58.7% |
| 4g59C02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.55 | 47.0 | 3.52e-01 | 92.6% | 43.0% |
| 2od0A00 | 3.30.1460.30 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone | 0.55 | 42.0 | 3.68e-01 | 82.4% | 94.2% |
| 1q7hA01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.54 | 42.0 | 4.33e-01 | 83.8% | 87.7% |
| 6mv2A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 39.0 | 3.44e-01 | 80.9% | 84.3% |
| 1t6aA02 | 3.30.310.120 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein | 0.52 | 40.0 | 3.89e-01 | 88.2% | 74.4% |
| 2uwaA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 42.0 | 2.81e-01 | 91.2% | 59.1% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 42.0 | 3.20e-01 | 91.2% | 74.2% |
| 4g59B00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.51 | 43.0 | 3.24e-01 | 92.6% | 46.6% |
| 3d79A01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.51 | 37.0 | 3.64e-01 | 77.9% | 94.6% |
| 3obaA05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.50 | 40.0 | 2.63e-01 | 86.8% | 97.6% |
| 5zx8A00 | 3.40.50.1470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase | 0.50 | 39.0 | 2.95e-01 | 88.2% | 80.1% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4226766 | 3894.1.1.3 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M | 0.65 | 44.0 | 3.52e-01 | 80.9% | 36.9% |
| 4390281 | 3894.1.1.3 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M | 0.65 | 44.0 | 3.62e-01 | 80.9% | 40.0% |
| 4030334 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.64 | 44.0 | 3.80e-01 | 72.1% | 85.8% |
| 4945660 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.60 | 39.0 | 3.03e-01 | 100.0% | 30.7% |
| 2631766 | 3894.1.1.1 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 | 0.59 | 43.0 | 3.46e-01 | 82.4% | 40.5% |
| 3279474 | 241.11.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › YjbR | 0.58 | 50.0 | 4.27e-01 | 98.5% | 93.0% |
| 5035266 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.57 | 47.0 | 4.45e-01 | 98.5% | 74.7% |
| 3992656 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.57 | 48.0 | 3.35e-01 | 94.1% | 64.8% |
| 1295901 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.57 | 39.0 | 3.17e-01 | 72.1% | 55.6% |
| 3839444 | 241.9.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like › DUF5655 | 0.57 | 45.0 | 3.77e-01 | 86.8% | 82.5% |
| 4954638 | 241.9.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like › DUF5655 | 0.57 | 45.0 | 3.83e-01 | 86.8% | 82.5% |
| 4981259 | 243.6.1.1 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 | 0.55 | 41.0 | 4.24e-01 | 79.4% | 89.2% |
| 3519113 | 330.1.1.24 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Paxt-1_C | 0.55 | 39.0 | 3.36e-01 | 76.5% | 84.5% |
| 4575824 | 2.8.1.2 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C_2 | 0.54 | 37.0 | 3.74e-01 | 72.1% | 81.4% |
| 5067171 | 243.6.1.1 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 | 0.54 | 41.0 | 4.18e-01 | 79.4% | 95.4% |
| 4980090 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.53 | 39.0 | 3.71e-01 | 98.5% | 66.3% |
| 1780243 | 3894.1.1.3 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M | 0.53 | 45.0 | 3.04e-01 | 94.1% | 62.3% |
| 4936682 | 243.6.1.8 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › AF_0587-like_pre-PUA | 0.52 | 44.0 | 4.13e-01 | 94.1% | 76.5% |
| 4030804 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.51 | 42.0 | 2.92e-01 | 100.0% | 80.7% |
| 4950889 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.51 | 38.0 | 3.74e-01 | 98.5% | 72.0% |
| 5031334 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.51 | 43.0 | 3.49e-01 | 98.5% | 92.1% |
| 3214098 | 330.1.1.24 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Paxt-1_C | 0.50 | 37.0 | 3.16e-01 | 79.4% | 67.3% |
| 2516891 | 2002.1.1.134 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 | 0.50 | 41.0 | 2.73e-01 | 98.5% | 74.2% |
| 4971298 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.50 | 38.0 | 3.74e-01 | 98.5% | 73.3% |