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OQ411014.1__WEM33130.1__EJP02_069__00069
Bact-VirOQ411014.1__WEM33130.1__EJP02_069__00069
Identity
- Accession:
- OQ411014 ↗
- Kingdom:
- phage
Quality
92.2
mean pLDDT
Taxonomy
TaxID: 3028122
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-96
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dfeA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 45.0 | 4.67e-01 | 76.7% | 90.2% |
| 2f9jA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 42.0 | 4.46e-01 | 75.6% | 96.2% |
| 2b4vA03 | 3.30.70.1970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 47.0 | 4.62e-01 | 88.9% | 97.0% |
| 2hvzA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 41.0 | 4.49e-01 | 74.4% | 100.0% |
| 2cqiA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 46.0 | 4.40e-01 | 86.7% | 88.3% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 41.0 | 4.07e-01 | 76.7% | 93.9% |
| 6hbzA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.57 | 49.0 | 4.12e-01 | 97.8% | 87.4% |
| 5a67A00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.57 | 40.0 | 3.11e-01 | 74.4% | 94.2% |
| 2uvaG03 | 3.30.70.3320 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 42.0 | 3.98e-01 | 78.9% | 83.3% |
| 1x8dA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 38.0 | 3.79e-01 | 73.3% | 99.0% |
| 2cyyA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.55 | 39.0 | 3.92e-01 | 76.7% | 76.8% |
| 3ihmA02 | 3.30.9.40 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › | 0.54 | 39.0 | 3.42e-01 | 76.7% | 75.7% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.53 | 35.0 | 3.93e-01 | 82.2% | 85.9% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 38.0 | 3.89e-01 | 75.6% | 80.0% |
| 3ifrB02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 45.0 | 3.42e-01 | 100.0% | 83.9% |
| 3mtkA00 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.53 | 44.0 | 3.76e-01 | 97.8% | 78.5% |
| 2kjwA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.52 | 37.0 | 3.72e-01 | 76.7% | 84.4% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 38.0 | 3.98e-01 | 100.0% | 85.4% |
| 4v1al00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.52 | 34.0 | 3.04e-01 | 74.4% | 45.1% |
| 3n89A02 | 3.30.310.210 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.51 | 42.0 | 3.79e-01 | 95.6% | 92.7% |
| 1t9zA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.51 | 43.0 | 3.46e-01 | 94.4% | 62.2% |
| 2ogkD00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.51 | 44.0 | 3.82e-01 | 97.8% | 97.9% |
| 2i4lA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 40.0 | 2.79e-01 | 90.0% | 56.5% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3554956 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.66 | 49.0 | 4.64e-01 | 77.8% | 80.0% |
| 4004021 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.64 | 49.0 | 4.52e-01 | 81.1% | 100.0% |
| 3776325 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.63 | 49.0 | 4.17e-01 | 83.3% | 59.5% |
| 3692327 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.63 | 45.0 | 4.67e-01 | 75.6% | 97.6% |
| 3235989 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.63 | 46.0 | 3.46e-01 | 78.9% | 40.9% |
| 3994612 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.62 | 44.0 | 4.69e-01 | 75.6% | 100.0% |
| 3788238 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.60 | 44.0 | 4.72e-01 | 75.6% | 100.0% |
| 3252197 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.60 | 45.0 | 4.50e-01 | 78.9% | 93.3% |
| 4979771 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.59 | 42.0 | 4.46e-01 | 75.6% | 90.0% |
| 3906342 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.59 | 44.0 | 4.12e-01 | 78.9% | 75.5% |
| 3305359 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.59 | 44.0 | 4.64e-01 | 80.0% | 100.0% |
| 4932501 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.59 | 42.0 | 4.12e-01 | 98.9% | 68.0% |
| 5035801 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.58 | 45.0 | 4.62e-01 | 83.3% | 96.5% |
| 3591214 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 49.0 | 3.97e-01 | 92.2% | 49.4% |
| 3629242 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 48.0 | 4.25e-01 | 90.0% | 83.8% |
| 3992849 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 48.0 | 4.40e-01 | 90.0% | 93.0% |
| 3391335 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.57 | 41.0 | 4.10e-01 | 74.4% | 94.4% |
| 3349076 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.57 | 44.0 | 3.88e-01 | 83.3% | 61.5% |
| 5011762 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.56 | 36.0 | 4.17e-01 | 73.3% | 98.3% |
| 3793409 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 44.0 | 3.30e-01 | 83.3% | 40.9% |
| 3616177 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.56 | 43.0 | 3.98e-01 | 83.3% | 76.7% |
| 5035456 | 304.19.1.1 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha | 0.55 | 40.0 | 4.17e-01 | 75.6% | 98.8% |
| 3784067 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.55 | 39.0 | 3.62e-01 | 75.6% | 65.8% |
| 3274039 | 4143.1.1.1 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP | 0.55 | 44.0 | 3.40e-01 | 92.2% | 97.4% |
| 3227523 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 46.0 | 4.09e-01 | 92.2% | 87.7% |
| 4185829 | 3253.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA | 0.54 | 31.0 | 3.78e-01 | 70.0% | 100.0% |
| 4019320 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 47.0 | 4.53e-01 | 94.4% | 100.0% |
| 4028770 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 42.0 | 4.26e-01 | 84.4% | 95.6% |
| 3869568 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 46.0 | 3.56e-01 | 96.7% | 82.4% |
| 3262571 | 60.1.2.6 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Beta-barrel_INTS6 | 0.54 | 39.0 | 2.74e-01 | 87.8% | 23.0% |
| 3410260 | 109.4.1.3503 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28415, PF29875 | 0.53 | 41.0 | 2.84e-01 | 84.4% | 42.4% |
| 1873722 | 2484.1.1.32 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_C | 0.53 | 45.0 | 3.45e-01 | 100.0% | 87.9% |
| 144952 | 304.5.1.10 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CBD_PlyG | 0.53 | 38.0 | 3.89e-01 | 75.6% | 80.0% |
| 3706633 | 148.1.3.174 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RHSP | 0.52 | 43.0 | 3.60e-01 | 92.2% | 92.1% |
| 3996296 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.51 | 44.0 | 4.05e-01 | 92.2% | 72.2% |