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OQ411014.1__WEM33244.1__EJP02_183__00183
Bact-VirOQ411014.1__WEM33244.1__EJP02_183__00183
Identity
- Accession:
- OQ411014 ↗
- Kingdom:
- phage
Quality
82.1
mean pLDDT
Taxonomy
TaxID: 3028122
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 73-125
Domain cluster:
rep: KT895374.1__ALN97800.1__Bp8pS_121__00121__D48-101
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vplA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 56.0 | 3.71e-01 | 100.0% | 40.3% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 59.0 | 4.98e-01 | 100.0% | 64.8% |
| 7r8bB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 51.0 | 3.36e-01 | 98.1% | 29.1% |
| 2r2iA02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.61 | 49.0 | 4.34e-01 | 98.1% | 88.5% |
| 4pkdB02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 48.0 | 3.82e-01 | 98.1% | 43.4% |
| 1xtfA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.58 | 41.0 | 2.42e-01 | 75.5% | 36.3% |
| 5e9hB01 | 1.10.10.850 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 43.0 | 3.52e-01 | 90.6% | 77.0% |
| 5w1uA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 43.0 | 2.59e-01 | 100.0% | 39.0% |
| 5t9pA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 46.0 | 4.01e-01 | 100.0% | 89.9% |
| 3wfdC00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.54 | 40.0 | 3.07e-01 | 84.9% | 47.9% |
| 4p55B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 37.0 | 3.19e-01 | 75.5% | 99.0% |
| 3u4qA02 | 1.10.274.50 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › | 0.52 | 41.0 | 3.13e-01 | 94.3% | 66.0% |
| 3h3aA04 | 1.10.246.80 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.51 | 40.0 | 4.07e-01 | 96.2% | 94.0% |
| 5zorA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 40.0 | 3.78e-01 | 100.0% | 84.9% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3972010 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.88 | 77.0 | 7.35e-01 | 94.3% | 96.7% |
| 3973526 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.86 | 78.0 | 6.34e-01 | 100.0% | 63.2% |
| 4613383 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 76.0 | 6.32e-01 | 98.1% | 65.6% |
| 3359799 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.78 | 69.0 | 5.02e-01 | 98.1% | 38.3% |
| 3970261 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.76 | 65.0 | 6.49e-01 | 94.3% | 92.6% |
| 4093350 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.74 | 63.0 | 5.98e-01 | 98.1% | 86.2% |
| 5079436 | 4020.1.1.3 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › TFX_C | 0.72 | 61.0 | 5.31e-01 | 94.3% | 82.5% |
| 4159466 | 4020.1.1.0 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes | 0.69 | 60.0 | 4.54e-01 | 100.0% | 49.6% |
| 3864510 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 52.0 | 3.27e-01 | 96.2% | 24.1% |
| 3544128 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 46.0 | 3.75e-01 | 86.8% | 80.0% |
| 3498350 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.58 | 46.0 | 3.78e-01 | 98.1% | 47.0% |
| 3617486 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.55 | 42.0 | 2.92e-01 | 92.5% | 59.0% |
| 3687780 | 109.4.1.958 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Vps41 | 0.54 | 37.0 | 2.20e-01 | 73.6% | 10.7% |
D2
high
residues 143-266
Domain cluster:
rep: MH494197.1__AXC39328.1__X__00616__D106-214
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00959.25 best | Phage_lysozyme | 42.4 | 1.10e-10 | 75.0% | 60.8% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.68 | 32.0 | 3.92e-01 | 97.6% | 67.9% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.65 | 38.0 | 4.26e-01 | 95.2% | 76.9% |
| 3l1nA02 | 1.20.1280.140 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.63 | 34.0 | 3.99e-01 | 89.5% | 73.6% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.62 | 29.0 | 3.75e-01 | 95.2% | 79.1% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 27.0 | 3.49e-01 | 75.0% | 73.7% |
| 1w0bA01 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.59 | 31.0 | 3.59e-01 | 89.5% | 68.5% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 29.0 | 2.95e-01 | 88.7% | 53.9% |
| 1i6zA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.51 | 31.0 | 3.06e-01 | 87.1% | 56.3% |
| 1r6bX03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.50 | 34.0 | 3.94e-01 | 97.6% | 96.6% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3595469 | 7014.1.1.0 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain | 0.54 | 35.0 | 3.41e-01 | 99.2% | 58.5% |
| 3990062 | 160.1.1.0 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0.51 | 35.0 | 3.87e-01 | 73.4% | 90.5% |
| 3690355 | 524.1.1.0 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p | 0.50 | 33.0 | 3.02e-01 | 96.0% | 49.4% |