←Back to structures

OQ411014.1__WEM33533.1__EJP02_472__00472

Bact-Vir

OQ411014.1__WEM33533.1__EJP02_472__00472

Identity

Accession:
OQ411014 ↗
Kingdom:
phage

Quality

82.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Asteriusvirus› Escherichia_phage_EJP2

TaxID: 3028122

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-79
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 55.0 5.27e-01 98.2% 71.4%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.71 54.0 5.45e-01 100.0% 83.3%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 52.0 4.80e-01 100.0% 60.3%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 53.0 5.27e-01 100.0% 82.1%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 51.0 4.75e-01 100.0% 63.8%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 51.0 4.98e-01 100.0% 75.0%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 54.0 5.66e-01 100.0% 98.0%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.68 49.0 5.14e-01 100.0% 89.6%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 50.0 5.12e-01 100.0% 86.5%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 51.0 5.01e-01 100.0% 79.7%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 4.79e-01 90.9% 87.5%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 3.82e-01 100.0% 41.2%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 51.0 4.86e-01 100.0% 73.8%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.63 51.0 5.06e-01 100.0% 86.7%
6fexA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 47.0 4.05e-01 87.3% 92.9%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 55.0 4.78e-01 100.0% 66.7%
3qdfA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.62 54.0 5.35e-01 100.0% 94.8%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 47.0 4.95e-01 98.2% 100.0%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.60 53.0 4.24e-01 100.0% 51.4%
3uw8A02 1.10.420.10 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 0.58 47.0 3.61e-01 92.7% 64.9%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 47.0 4.59e-01 98.2% 85.7%
4qjvA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.55 38.0 3.39e-01 76.4% 75.3%
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 43.0 3.73e-01 90.9% 94.4%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.54 41.0 3.98e-01 100.0% 75.8%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 3.76e-01 100.0% 85.2%
3njcA00 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.54 41.0 3.10e-01 87.3% 52.9%
1ueyA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 39.0 3.13e-01 83.6% 70.1%
3if4A01 2.20.20.40 Mainly Beta › Single Sheet › Anthopleurin-A › Integron cassette protein 0.53 36.0 3.78e-01 72.7% 94.0%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.53 38.0 3.58e-01 81.8% 86.7%
2mizA00 2.60.40.2900 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 38.0 2.92e-01 83.6% 72.4%
3nwsA01 2.40.50.800 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 40.0 3.15e-01 92.7% 87.2%
1aq3A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.51 43.0 3.29e-01 94.5% 80.6%
2hboA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 39.0 3.06e-01 87.3% 74.4%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.51 41.0 3.17e-01 92.7% 84.4%
1golA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 40.0 3.13e-01 90.9% 75.0%
2xu8A00 3.90.70.190 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Domain of unknown function (DUF5086) 0.50 41.0 3.38e-01 100.0% 57.8%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.50 39.0 3.11e-01 89.1% 78.0%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3230533 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 55.0 5.98e-01 94.5% 88.9%
3683031 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 58.0 5.26e-01 100.0% 62.7%
3485965 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 56.0 5.49e-01 100.0% 75.0%
3875218 4.1.1.128 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.72 54.0 5.17e-01 98.2% 69.2%
4422251 4.1.1.98 ↗ beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.71 50.0 5.20e-01 96.4% 82.0%
4191690 4.1.1.98 ↗ beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.71 51.0 5.01e-01 98.2% 72.4%
4075769 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.71 54.0 5.45e-01 100.0% 81.8%
4949848 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.71 50.0 5.05e-01 100.0% 76.4%
3586487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 53.0 4.61e-01 100.0% 52.9%
3451171 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.24e-01 100.0% 73.8%
3546607 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.69 50.0 5.23e-01 100.0% 86.0%
3922679 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.69 51.0 5.32e-01 98.2% 88.0%
3299797 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.68 50.0 4.89e-01 100.0% 73.3%
3586953 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 57.0 5.50e-01 100.0% 83.1%
3794450 219.1.1.25 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT 0.67 59.0 4.26e-01 100.0% 54.8%
3326980 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.67 49.0 4.80e-01 100.0% 73.3%
4368811 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.66 49.0 4.93e-01 100.0% 81.8%
3964733 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 48.0 4.83e-01 100.0% 80.0%
4147366 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.66 48.0 5.00e-01 100.0% 91.7%
4128902 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 48.0 5.01e-01 100.0% 90.0%
3241998 377.11.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › THAP domain › THAP domain 0.65 54.0 4.05e-01 96.4% 89.0%
4466506 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 55.0 4.99e-01 100.0% 77.3%
4033182 4.1.1.61 ↗ beta barrels › SH3 › SH3 › SH3 › KapB 0.63 56.0 4.33e-01 100.0% 59.2%
3796536 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.62 50.0 4.50e-01 90.9% 77.5%
3690375 708.1.2.6 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA 0.62 51.0 3.90e-01 96.4% 83.6%
3801650 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 55.0 4.68e-01 100.0% 72.2%
3174977 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.62 54.0 4.55e-01 100.0% 85.3%
4317167 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.62 53.0 4.77e-01 100.0% 70.0%
3607981 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 53.0 4.82e-01 98.2% 85.1%
2978978 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.61 51.0 4.65e-01 96.4% 84.0%
3800384 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.61 52.0 4.19e-01 100.0% 83.5%
4196537 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.60 51.0 4.67e-01 98.2% 74.7%
4680746 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.60 51.0 4.64e-01 98.2% 72.0%
3231154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 53.0 4.68e-01 100.0% 90.0%
2550473 3820.1.1.0 ↗ a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain 0.60 49.0 4.52e-01 100.0% 69.6%
4555816 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 50.0 4.44e-01 100.0% 65.9%
3387378 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.59 50.0 4.44e-01 100.0% 68.2%
3389662 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.59 49.0 4.46e-01 100.0% 72.5%
4136524 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.59 49.0 3.32e-01 100.0% 27.1%
3580039 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.58 51.0 3.67e-01 100.0% 51.9%
4204477 1.1.5.81 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PF27476 0.58 44.0 3.89e-01 89.1% 78.7%
3217772 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 49.0 4.32e-01 100.0% 83.5%
3964334 3012.1.1.0 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.57 41.0 3.79e-01 78.2% 74.7%
3702416 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 50.0 4.15e-01 100.0% 64.0%
3586192 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.57 47.0 4.27e-01 92.7% 81.3%
5080798 4.17.1.0 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like 0.57 47.0 4.34e-01 96.4% 85.3%
3625996 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.56 48.0 4.03e-01 100.0% 84.0%
3621272 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.55 48.0 3.64e-01 100.0% 64.4%
4025781 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 45.0 4.41e-01 90.9% 88.3%
3576800 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.53 46.0 3.91e-01 100.0% 87.4%
3787358 708.1.1.6 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › Gti1_Pac2 0.53 40.0 2.92e-01 83.6% 58.2%
1522 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.53 39.0 3.13e-01 83.6% 70.1%
4173721 304.12.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 0.52 39.0 3.41e-01 85.5% 89.5%