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OQ411014.1__WEM33544.1__EJP02_483__00483
Bact-VirOQ411014.1__WEM33544.1__EJP02_483__00483
Identity
- Accession:
- OQ411014 ↗
- Kingdom:
- phage
Quality
79.1
mean pLDDT
Taxonomy
TaxID: 3028122
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-85
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rzmA01 | 3.30.70.1140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 | 0.77 | 56.0 | 5.44e-01 | 100.0% | 68.8% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.73 | 63.0 | 5.90e-01 | 100.0% | 77.6% |
| 3cxjA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.72 | 63.0 | 5.05e-01 | 100.0% | 56.9% |
| 3n89A02 | 3.30.310.210 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.72 | 56.0 | 4.52e-01 | 95.8% | 43.8% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 51.0 | 4.89e-01 | 95.8% | 64.7% |
| 3bt7A02 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.70 | 57.0 | 4.52e-01 | 90.1% | 46.2% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.67 | 55.0 | 5.42e-01 | 100.0% | 85.3% |
| 3cjeA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.67 | 52.0 | 4.17e-01 | 87.3% | 62.0% |
| 1i6uA01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.66 | 39.0 | 4.02e-01 | 81.7% | 61.8% |
| 4fh3A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.64 | 51.0 | 4.30e-01 | 90.1% | 75.2% |
| 2kdnA00 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.64 | 49.0 | 4.38e-01 | 87.3% | 59.3% |
| 3gkuC02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.63 | 52.0 | 4.86e-01 | 91.5% | 84.3% |
| 4ivkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.63 | 54.0 | 3.40e-01 | 98.6% | 96.0% |
| 1kn6A00 | 3.30.70.850 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8, pro-domain | 0.61 | 47.0 | 4.68e-01 | 100.0% | 82.2% |
| 2y8yA01 | 3.30.70.1200 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 | 0.61 | 51.0 | 4.78e-01 | 100.0% | 76.7% |
| 3ix3A00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.60 | 47.0 | 3.77e-01 | 91.5% | 92.0% |
| 3tvzB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 45.0 | 3.68e-01 | 88.7% | 43.1% |
| 1i94H01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.59 | 42.0 | 4.11e-01 | 81.7% | 69.2% |
| 4at7A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.58 | 50.0 | 3.98e-01 | 98.6% | 63.2% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.57 | 44.0 | 3.25e-01 | 87.3% | 66.2% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.57 | 43.0 | 2.77e-01 | 83.1% | 75.8% |
| 5koxA02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 47.0 | 4.45e-01 | 100.0% | 79.1% |
| 2lfvA00 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.54 | 42.0 | 3.72e-01 | 93.0% | 56.6% |
| 2qlzA02 | 6.10.250.2960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.54 | 35.0 | 3.30e-01 | 80.3% | 54.7% |
| 4mtnA01 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.54 | 45.0 | 4.18e-01 | 98.6% | 82.1% |
| 3sluA02 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 43.0 | 3.57e-01 | 91.5% | 90.5% |
| 8a5eD01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 41.0 | 4.00e-01 | 100.0% | 77.2% |
| 2hoeA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 31.0 | 3.42e-01 | 83.1% | 70.7% |
| 2xf1A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.53 | 42.0 | 3.61e-01 | 91.5% | 73.0% |
| 1tzlA02 | 3.30.1920.50 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › | 0.52 | 35.0 | 3.71e-01 | 71.8% | 82.3% |
| 3p26A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 39.0 | 2.83e-01 | 83.1% | 63.5% |
| 5h7kA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 42.0 | 2.89e-01 | 88.7% | 63.2% |
| 2fswA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 36.0 | 3.22e-01 | 90.1% | 52.9% |
| 2bcfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.50 | 40.0 | 2.78e-01 | 90.1% | 24.9% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4322692 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.77 | 63.0 | 6.09e-01 | 100.0% | 80.0% |
| 4556593 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.76 | 64.0 | 6.17e-01 | 100.0% | 82.5% |
| 4411246 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.76 | 64.0 | 6.17e-01 | 100.0% | 82.5% |
| 4668421 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.73 | 62.0 | 6.03e-01 | 100.0% | 83.7% |
| 3165390 | 304.24.1.36 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SPOR | 0.73 | 55.0 | 5.32e-01 | 100.0% | 72.5% |
| 2323881 | 3433.1.2.1 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer | 0.72 | 50.0 | 5.51e-01 | 81.7% | 94.4% |
| 4463014 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.71 | 59.0 | 5.83e-01 | 100.0% | 88.0% |
| 4087209 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.71 | 59.0 | 5.74e-01 | 100.0% | 82.5% |
| 5035383 | 305.2.1.3 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › PF27806 | 0.69 | 58.0 | 5.43e-01 | 98.6% | 74.4% |
| 4989946 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.68 | 52.0 | 4.55e-01 | 93.0% | 53.6% |
| 3493241 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.68 | 58.0 | 4.42e-01 | 98.6% | 92.6% |
| 3236563 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.67 | 49.0 | 4.03e-01 | 76.1% | 92.0% |
| 4954761 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.67 | 56.0 | 4.72e-01 | 100.0% | 55.0% |
| 3877590 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.66 | 55.0 | 5.48e-01 | 100.0% | 90.7% |
| 3711102 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.66 | 39.0 | 3.54e-01 | 77.5% | 42.0% |
| 4988168 | 304.15.1.0 ↗ | a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain | 0.65 | 47.0 | 5.00e-01 | 85.9% | 90.0% |
| 4217761 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.65 | 48.0 | 4.71e-01 | 95.8% | 73.4% |
| 3680527 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.64 | 47.0 | 4.65e-01 | 84.5% | 74.7% |
| 4948475 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.64 | 52.0 | 4.26e-01 | 93.0% | 49.3% |
| 4012898 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.62 | 38.0 | 3.39e-01 | 76.1% | 42.0% |
| 3458015 | 109.20.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Coatomer subunit alpha C-terminal domain › Coatomer subunit alpha C-terminal domain › COPI_C | 0.61 | 38.0 | 2.65e-01 | 91.5% | 18.0% |
| 3728094 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.61 | 38.0 | 3.40e-01 | 77.5% | 43.0% |
| 3602517 | 327.13.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system | 0.61 | 47.0 | 4.58e-01 | 85.9% | 75.0% |
| 3193439 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.60 | 53.0 | 3.50e-01 | 100.0% | 44.0% |
| 4171345 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.58 | 47.0 | 4.34e-01 | 94.4% | 68.4% |
| 3740807 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.56 | 38.0 | 3.64e-01 | 91.5% | 58.8% |
| 3874464 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.56 | 46.0 | 3.01e-01 | 94.4% | 76.1% |
| 4929958 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.54 | 37.0 | 3.09e-01 | 70.4% | 61.3% |
| 4970289 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.53 | 35.0 | 3.28e-01 | 85.9% | 53.3% |
| 5045170 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 45.0 | 4.24e-01 | 100.0% | 83.3% |
| 5075830 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 36.0 | 3.08e-01 | 71.8% | 62.7% |
| 3879591 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 42.0 | 2.89e-01 | 98.6% | 89.5% |
| 5055279 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.51 | 46.0 | 3.28e-01 | 100.0% | 74.6% |
| 3232234 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.51 | 34.0 | 2.86e-01 | 74.6% | 37.3% |
| 4971494 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 37.0 | 3.12e-01 | 76.1% | 58.3% |
| 5054938 | 101.1.2.271 ↗ | alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC | 0.51 | 36.0 | 3.04e-01 | 74.6% | 56.3% |
| 4940657 | 101.1.2.269 ↗ | alpha arrays › HTH › HTH › winged helix domain › SocA_Panacea | 0.51 | 42.0 | 3.34e-01 | 98.6% | 64.0% |
| 4948012 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 36.0 | 3.06e-01 | 74.6% | 60.0% |
| 3743748 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 39.0 | 3.70e-01 | 88.7% | 100.0% |
| 5000798 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.50 | 40.0 | 2.95e-01 | 85.9% | 87.6% |
| 4017553 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.50 | 41.0 | 3.79e-01 | 94.4% | 97.9% |
| 5001130 | 101.1.2.44 ↗ | alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S25 | 0.50 | 42.0 | 3.73e-01 | 90.1% | 81.0% |
| 4948157 | 304.56.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like | 0.50 | 42.0 | 3.91e-01 | 100.0% | 75.5% |