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OQ414636.1__WDQ27623.1__EXVC031PHodr_042__00042

Bact-Vir

OQ414636.1__WDQ27623.1__EXVC031PHodr_042__00042

Identity

Accession:
OQ414636 ↗
Kingdom:
phage

Quality

94.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pelagibacter_phage_EXVC032P_Baldr

TaxID: 3029571

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-24_40-100
PDB
Domain cluster: rep: MH598800.1__AXH71637.1__P031_gp16__00016__D14-90
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.86 54.0 5.84e-01 77.6% 74.2%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 56.0 5.42e-01 78.9% 69.9%
3ic8A01 3.40.30.110 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.76 53.0 3.93e-01 77.6% 31.1%
4m78N00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 56.0 5.80e-01 80.3% 81.7%
2f5tX02 2.30.30.690 Mainly Beta › Roll › SH3 type barrels. › 0.72 56.0 5.27e-01 81.6% 77.8%
1b34B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 53.0 5.39e-01 80.3% 78.4%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.69 49.0 5.19e-01 77.6% 85.1%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 44.0 4.70e-01 78.9% 77.3%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.65 42.0 4.86e-01 73.7% 100.0%
3zoqC00 6.20.250.30 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.64 43.0 5.00e-01 85.5% 100.0%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.64 50.0 3.63e-01 85.5% 71.8%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 44.0 4.75e-01 80.3% 87.7%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 38.0 4.10e-01 76.3% 75.0%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.74e-01 92.1% 100.0%
2oviA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.59 44.0 3.56e-01 81.6% 83.5%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.59 43.0 3.94e-01 78.9% 57.7%
1wi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 44.0 3.92e-01 80.3% 79.3%
5jgfA02 2.30.250.10 Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 0.59 47.0 3.81e-01 86.8% 75.2%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 43.0 4.47e-01 81.6% 87.5%
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 42.0 3.59e-01 80.3% 71.7%
1vwxS02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.55 45.0 4.55e-01 89.5% 97.4%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.55 46.0 4.64e-01 92.1% 92.1%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.55 38.0 3.79e-01 77.6% 69.6%
2l1tA00 2.30.110.70 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.55 39.0 3.54e-01 78.9% 53.2%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 39.0 4.02e-01 77.6% 90.3%
2hhzA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 39.0 3.25e-01 81.6% 42.8%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 40.0 3.76e-01 81.6% 79.2%
3bk5A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.53 44.0 3.17e-01 92.1% 89.8%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.53 41.0 3.18e-01 84.2% 88.1%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.53 45.0 3.36e-01 98.7% 91.4%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 39.0 3.48e-01 80.3% 53.5%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 38.0 2.83e-01 78.9% 28.9%
4lqzA00 2.40.128.570 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4909 0.53 36.0 3.15e-01 73.7% 100.0%
3rb5A02 2.60.40.2030 Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain 0.52 36.0 3.11e-01 92.1% 44.0%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 37.0 2.98e-01 78.9% 37.0%
2imlA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 37.0 3.30e-01 78.9% 51.3%
2i51B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 39.0 2.94e-01 86.8% 32.5%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 38.0 3.13e-01 80.3% 89.1%
2w7qB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.51 42.0 3.27e-01 93.4% 83.9%
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 35.0 3.45e-01 82.9% 64.7%
2fhqA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 36.0 3.03e-01 78.9% 43.0%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5080336 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.89 61.0 6.71e-01 78.9% 84.4%
4118226 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.87 61.0 6.37e-01 80.3% 78.6%
3290160 4.1.1.323 ↗ beta barrels › SH3 › SH3 › SH3 › WYL 0.86 61.0 5.98e-01 77.6% 68.8%
3721787 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 67.0 6.47e-01 85.5% 87.1%
4660084 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.82 57.0 6.04e-01 80.3% 79.7%
4625654 4.1.1.445 ↗ beta barrels › SH3 › SH3 › SH3 › Spore_GerQ 0.81 62.0 6.27e-01 80.3% 80.0%
4574546 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.80 57.0 6.17e-01 78.9% 86.2%
4079197 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 56.0 5.37e-01 78.9% 64.7%
3602785 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 56.0 6.32e-01 78.9% 93.3%
4264671 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.79 64.0 6.31e-01 93.4% 81.2%
3328647 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.78 61.0 5.85e-01 84.2% 72.9%
3173156 4.1.1.344 ↗ beta barrels › SH3 › SH3 › SH3 › PF31193 0.78 62.0 6.07e-01 84.2% 78.8%
3973076 109.1.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.77 53.0 3.66e-01 76.3% 23.5%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 58.0 5.88e-01 78.9% 84.0%
3736175 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 53.0 5.09e-01 76.3% 63.5%
4282868 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.77 58.0 6.02e-01 80.3% 84.3%
3574742 4.1.1.47 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin6 0.76 63.0 5.90e-01 86.8% 81.1%
3727542 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 53.0 5.00e-01 77.6% 61.1%
3624163 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 62.0 5.86e-01 86.8% 81.1%
4183853 4.1.1.435 ↗ beta barrels › SH3 › SH3 › SH3 › PF29216 0.76 54.0 5.65e-01 76.3% 81.4%
3936130 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 62.0 5.71e-01 86.8% 82.1%
4988761 4.15.1.2 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.75 59.0 5.56e-01 82.9% 75.6%
3953109 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.75 60.0 5.54e-01 84.2% 68.4%
3519122 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.75 60.0 5.63e-01 84.2% 71.1%
4545520 4.7.1.7 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › WYL 0.75 60.0 5.78e-01 84.2% 76.5%
3972550 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.75 60.0 5.39e-01 84.2% 64.0%
5043132 4.15.1.2 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.75 59.0 5.73e-01 84.2% 78.8%
3959770 4.31.1.0 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 0.75 60.0 5.62e-01 84.2% 72.2%
3232582 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 61.0 5.59e-01 85.5% 71.6%
3189199 109.1.1.35 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › PF25907 0.74 53.0 3.52e-01 76.3% 21.1%
3978997 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.74 61.0 5.59e-01 86.8% 69.5%
5041801 4.15.1.0 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like 0.74 59.0 5.66e-01 85.5% 75.3%
3942912 4.1.1.323 ↗ beta barrels › SH3 › SH3 › SH3 › WYL 0.74 60.0 5.82e-01 86.8% 77.6%
3227009 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.74 51.0 5.22e-01 75.0% 73.3%
4466506 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 55.0 5.55e-01 78.9% 84.0%
3819397 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.73 62.0 6.15e-01 90.8% 87.5%
5042597 4.15.1.0 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like 0.73 60.0 5.66e-01 88.2% 76.7%
3936053 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.73 53.0 5.49e-01 77.6% 81.4%
4225787 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 58.0 5.18e-01 82.9% 64.0%
4140958 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 57.0 5.80e-01 82.9% 84.0%
4515863 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 57.0 4.96e-01 82.9% 57.3%
3500684 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.72 54.0 5.35e-01 80.3% 75.0%
4031510 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 57.0 5.39e-01 84.2% 71.1%
4992755 4.15.1.2 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.72 55.0 5.25e-01 82.9% 72.2%
3772638 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.72 52.0 5.14e-01 78.9% 71.6%
3740204 4.1.1.71 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin7 0.71 53.0 5.15e-01 81.6% 70.6%
4982722 4.15.1.2 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.71 55.0 5.37e-01 84.2% 77.6%
3625817 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.70 60.0 5.87e-01 90.8% 86.3%
3473464 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.69 55.0 4.22e-01 84.2% 64.0%
3339169 4.1.1.415 ↗ beta barrels › SH3 › SH3 › SH3 › PNPOx_N 0.66 46.0 4.51e-01 77.6% 65.9%
3967347 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.66 48.0 4.91e-01 78.9% 78.7%
3601070 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 47.0 5.07e-01 76.3% 95.4%
3924377 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 43.0 4.90e-01 75.0% 94.5%
3520654 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.63 43.0 3.43e-01 78.9% 35.3%
3377696 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.63 41.0 2.99e-01 78.9% 25.0%
3615787 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.61 41.0 2.92e-01 78.9% 23.1%
3928711 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 46.0 4.49e-01 81.6% 92.9%
3645395 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.61 44.0 4.40e-01 77.6% 93.8%
4016602 4.1.1.179 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6590 0.61 49.0 4.06e-01 90.8% 86.0%
3598734 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.61 40.0 2.83e-01 78.9% 22.1%
3933047 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.60 40.0 3.17e-01 75.0% 33.1%
4004815 4.1.1.166 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2314 0.59 44.0 3.80e-01 80.3% 55.3%
4500974 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.58 40.0 3.51e-01 81.6% 45.8%
3233461 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 42.0 4.69e-01 77.6% 98.3%
3876680 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.58 43.0 3.95e-01 78.9% 60.0%
5084081 219.1.1.76 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 0.58 45.0 3.33e-01 84.2% 74.9%
3342304 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 41.0 3.34e-01 77.6% 69.0%
3804236 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 43.0 3.56e-01 84.2% 80.7%
3727760 219.1.1.129 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF7770 0.56 47.0 3.90e-01 93.4% 65.9%
3203375 219.1.1.129 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF7770 0.55 45.0 3.76e-01 88.2% 59.4%
3807010 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 41.0 3.40e-01 80.3% 68.6%
5075917 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.55 43.0 3.47e-01 85.5% 90.7%
4656128 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.54 43.0 3.27e-01 88.2% 90.5%
3315951 220.1.1.86 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.54 42.0 4.24e-01 86.8% 100.0%
4976152 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.54 43.0 3.50e-01 89.5% 92.3%
161432 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.54 39.0 3.25e-01 81.6% 42.4%
3498264 219.1.1.53 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Vasohibin 0.54 43.0 3.03e-01 89.5% 32.9%
4953386 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.54 41.0 3.39e-01 82.9% 95.0%
3611892 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.54 36.0 2.75e-01 77.6% 27.9%
4963369 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.53 39.0 3.10e-01 80.3% 100.0%
3229867 1.1.17.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.53 35.0 2.46e-01 78.9% 19.7%
4991701 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 39.0 2.90e-01 80.3% 63.7%
3901117 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.53 43.0 3.38e-01 94.7% 48.9%
3278845 1.1.5.15 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red 0.52 41.0 3.35e-01 85.5% 62.1%
3726267 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.52 43.0 3.14e-01 92.1% 82.8%
4498332 71.1.1.2 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.52 42.0 3.32e-01 89.5% 82.4%
4217523 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.51 39.0 3.37e-01 84.2% 89.6%