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OQ417962.1__WJJ55456.1__PROPHIT492_50__00050
Bact-VirOQ417962.1__WJJ55456.1__PROPHIT492_50__00050
Identity
- Accession:
- OQ417962 ↗
- Kingdom:
- phage
Quality
65.5
mean pLDDT
Taxonomy
TaxID: 3032460
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-190
Domain cluster:
rep: KM199771.1__AIK68527.1__Lo5R7ANS_57__00057__D358-488_526-544
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21722.5 best | Gly_rich_2 | 47.3 | 3.80e-12 | 94.7% | 97.8% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cq9A00 | 3.40.50.10240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain | 0.64 | 28.0 | 2.78e-01 | 98.4% | 39.6% |
| 4ohvA01 | 2.60.120.1030 | Mainly Beta › Sandwich › Jelly Rolls › Clp1, DNA binding domain | 0.64 | 25.0 | 3.84e-01 | 98.4% | 86.3% |
| 1o5uA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 22.0 | 3.13e-01 | 97.9% | 62.5% |
| 1pm4A00 | 2.60.120.510 | Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm | 0.63 | 27.0 | 3.35e-01 | 100.0% | 63.2% |
| 3waiA02 | 2.60.40.3390 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 24.0 | 3.29e-01 | 93.2% | 75.3% |
| 3lwcA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 24.0 | 3.22e-01 | 99.5% | 71.8% |
| 5xnrA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 26.0 | 3.17e-01 | 99.5% | 65.4% |
| 4ca9A00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.54 | 28.0 | 3.79e-01 | 100.0% | 95.9% |
| 3cf6E02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 25.0 | 3.18e-01 | 98.4% | 75.0% |
| 2vvfA02 | 2.60.120.730 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 26.0 | 3.19e-01 | 98.9% | 73.4% |
| 7pzaA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 22.0 | 2.66e-01 | 98.4% | 55.7% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1276801 | 10.11.1.1 ↗ | beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain › TPK_B1_binding | 0.63 | 29.0 | 4.36e-01 | 100.0% | 100.0% |
| 138055 | 10.11.1.1 ↗ | beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain › TPK_B1_binding | 0.61 | 28.0 | 4.12e-01 | 99.5% | 97.7% |
| 3927098 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 25.0 | 3.28e-01 | 100.0% | 67.3% |
| 5038687 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 32.0 | 4.32e-01 | 97.4% | 100.0% |
| 3934762 | 10.32.1.258 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N | 0.57 | 30.0 | 4.14e-01 | 97.9% | 98.0% |
| 3629305 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.57 | 25.0 | 3.14e-01 | 100.0% | 66.4% |
| 4464442 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.57 | 27.0 | 3.55e-01 | 100.0% | 79.1% |
| 3919483 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.56 | 25.0 | 2.13e-01 | 100.0% | 25.0% |
| 3933157 | 11.1.1.1085 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GBD_IRG7_N | 0.56 | 30.0 | 4.09e-01 | 98.4% | 100.0% |
| 3214876 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 29.0 | 4.00e-01 | 97.9% | 99.0% |
| 3935807 | 10.32.1.258 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N | 0.55 | 27.0 | 3.90e-01 | 93.7% | 100.0% |
| 4181607 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 29.0 | 3.53e-01 | 100.0% | 80.0% |
| 5019286 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 27.0 | 3.63e-01 | 98.4% | 91.0% |
| 1198 | 10.2.1.31 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin | 0.53 | 30.0 | 3.94e-01 | 98.4% | 100.0% |
| 4979173 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 29.0 | 3.82e-01 | 100.0% | 97.1% |
| 4027774 | 710.1.1.1 ↗ | beta complex topology › Obg GTP-binding protein N-terminal domain › Obg GTP-binding protein N-terminal domain › Obg GTP-binding protein N-terminal domain › GTP1_OBG | 0.53 | 41.0 | 4.56e-01 | 86.8% | 100.0% |
| 5005760 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 28.0 | 3.28e-01 | 99.5% | 74.6% |
| 4942276 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.51 | 24.0 | 3.34e-01 | 98.4% | 91.1% |
| 3849772 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.50 | 30.0 | 3.63e-01 | 100.0% | 90.8% |
| 3258386 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.50 | 30.0 | 3.72e-01 | 98.9% | 95.7% |
D2
medium
residues 279-448