Back to structures

OQ417967.1__WJJ55965.1__PROPHIT491_29__00029

Bact-Vir

OQ417967.1__WJJ55965.1__PROPHIT491_29__00029

Identity

Accession:
OQ417967 ↗
Kingdom:
phage

Quality

86.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 72-144
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4i86A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.51 33.0 3.02e-01 84.9% 48.0%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3621341 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.52 40.0 4.05e-01 83.6% 100.0%
3722004 1.1.7.24 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 0.50 37.0 3.41e-01 89.0% 58.1%
D2 medium residues 34-64_153-199
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF14216.13 best DUF4326 32.7 1.30e-07 56.4% 35.3%
PF14216.13 DUF4326 27.8 4.30e-06 48.7% 36.5%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3u40D00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.56 41.0 2.97e-01 79.5% 72.6%
4zoqM00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.53 38.0 2.56e-01 76.9% 88.9%
7wj9A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.50 43.0 2.96e-01 100.0% 97.4%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4029836 2007.2.3.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.62 54.0 4.17e-01 100.0% 66.5%
3704309 2488.1.1.0 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot 0.57 50.0 3.52e-01 100.0% 81.2%
3934141 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 48.0 3.73e-01 100.0% 75.8%
5000494 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.54 46.0 3.38e-01 100.0% 73.9%
4243347 2002.1.1.139 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › BKACE 0.52 39.0 2.80e-01 84.6% 94.2%
3216602 2011.1.1.1 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M14 0.52 43.0 3.02e-01 100.0% 65.9%