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OQ417969.1__WJJ56106.1__PROPHIT371_24__00023
Bact-VirOQ417969.1__WJJ56106.1__PROPHIT371_24__00023
Identity
- Accession:
- OQ417969 ↗
- Kingdom:
- phage
Quality
83.1
mean pLDDT
Taxonomy
TaxID: 3032454
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-143
Domain cluster:
rep: rifcsphigho2_12_scaffold_16_prodigal-single.1__X__X__00048__D76-188
D2
high
residues 223-295
Domain cluster:
rep: MK291445.1__AZV00424.1__pyei1_p07__00007__D165-223
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04447.18 best | dATP-dGTP_PPHyd | 57.0 | 2.60e-15 | 100.0% | 72.2% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ehwA00 | 6.10.140.1220 | Special › Helix non-globular › Helix Hairpins › | 0.81 | 56.0 | 4.73e-01 | 71.2% | 77.4% |
| 2hjmA01 | 1.20.120.460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like | 0.77 | 53.0 | 5.02e-01 | 71.2% | 98.8% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 53.0 | 4.80e-01 | 74.0% | 84.4% |
| 2itbB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.70 | 50.0 | 3.59e-01 | 74.0% | 50.5% |
| 1lqsL01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.70 | 49.0 | 4.42e-01 | 74.0% | 87.0% |
| 1xwjA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.70 | 49.0 | 4.04e-01 | 74.0% | 64.6% |
| 3bh1A02 | 1.20.1570.10 | Mainly Alpha › Up-down Bundle › dip2346 fold › dip2346 domain like | 0.69 | 47.0 | 4.23e-01 | 71.2% | 88.1% |
| 3ezuA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.64 | 46.0 | 3.40e-01 | 74.0% | 53.3% |
| 4iluA02 | 1.20.58.1290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain | 0.63 | 44.0 | 3.87e-01 | 82.2% | 48.6% |
| 2qr4A01 | 1.20.140.70 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Oligopeptidase f, N-terminal domain | 0.62 | 50.0 | 3.93e-01 | 89.0% | 89.1% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 46.0 | 4.36e-01 | 86.3% | 83.5% |
| 2ymmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 38.0 | 3.90e-01 | 79.5% | 80.8% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3947647 | 159.1.2.3 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › dATP-dGTP_PPHyd | 0.80 | 70.0 | 6.40e-01 | 100.0% | 73.7% |
| 3686594 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.74 | 52.0 | 5.02e-01 | 72.6% | 76.2% |
| 1866769 | 219.1.1.68 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › RickCE_cat | 0.71 | 51.0 | 3.40e-01 | 74.0% | 23.1% |
| 3942324 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.69 | 52.0 | 5.32e-01 | 78.1% | 88.6% |
| 3593945 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 58.0 | 4.08e-01 | 91.8% | 68.3% |
| 3930731 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.67 | 47.0 | 4.33e-01 | 74.0% | 86.3% |
| 5049144 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 54.0 | 3.67e-01 | 86.3% | 29.1% |
| 3650651 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.62 | 50.0 | 3.29e-01 | 89.0% | 73.1% |
| 3263009 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.59 | 47.0 | 3.18e-01 | 91.8% | 22.5% |
| 4953267 | 632.11.1.19 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DUF2096_N | 0.58 | 44.0 | 4.03e-01 | 83.6% | 72.0% |
| 3471416 | 109.4.1.431 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ERK-JNK_inhib | 0.57 | 47.0 | 3.88e-01 | 95.9% | 89.0% |
| 3684126 | 109.4.1.1269 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif | 0.56 | 45.0 | 3.61e-01 | 84.9% | 82.1% |
| 5063778 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.55 | 40.0 | 2.49e-01 | 76.7% | 42.2% |
D3
medium
residues 151-188
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4v19000 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.58 | 47.0 | 3.50e-01 | 100.0% | 35.1% |
| 5w17A01 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.56 | 40.0 | 2.71e-01 | 100.0% | 18.7% |
| 4lvnP00 | 3.30.70.2380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 38.0 | 3.13e-01 | 84.2% | 75.3% |
| 3d2mA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 38.0 | 2.81e-01 | 100.0% | 32.0% |
| 4x9xA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 42.0 | 2.89e-01 | 100.0% | 73.2% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3479881 | 325.1.8.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein | 0.67 | 51.0 | 3.82e-01 | 100.0% | 31.9% |
| 4297367 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.58 | 42.0 | 3.70e-01 | 89.5% | 100.0% |
| 3559191 | 1086.1.1.0 ↗ | beta meanders › C-terminal beta-hairpin in astrotactin-2 › C-terminal beta-hairpin in astrotactin-2 › C-terminal beta-hairpin in astrotactin-2 | 0.55 | 46.0 | 4.16e-01 | 97.4% | 83.6% |
| 3261043 | 11.1.1.595 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NUP210_Ig2 | 0.55 | 40.0 | 3.03e-01 | 84.2% | 64.5% |
| 3164772 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 46.0 | 3.81e-01 | 100.0% | 100.0% |
| None | — | 0.53 | 41.0 | 2.47e-01 | 92.1% | 69.7% | |
| 5015822 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.52 | 41.0 | 3.10e-01 | 100.0% | 72.7% |
| 3463085 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 40.0 | 3.40e-01 | 94.7% | 48.0% |