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OQ417971.1__WJJ56304.1__PROPHIT501_16__00015
Bact-VirOQ417971.1__WJJ56304.1__PROPHIT501_16__00015
Identity
- Accession:
- OQ417971 ↗
- Kingdom:
- phage
Quality
87.1
mean pLDDT
Taxonomy
TaxID: 3032462
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 30-84
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x0tA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.90 | 63.0 | 6.07e-01 | 72.7% | 70.5% |
| 3ehfD01 | 1.20.5.1930 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.90 | 68.0 | 6.42e-01 | 78.2% | 76.2% |
| 4n06A02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.88 | 66.0 | 4.09e-01 | 78.2% | 20.8% |
| 4hb1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.83 | 58.0 | 6.39e-01 | 74.5% | 90.9% |
| 3gzkA02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.79 | 70.0 | 4.07e-01 | 98.2% | 40.0% |
| 1ia6A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.79 | 72.0 | 4.20e-01 | 100.0% | 41.1% |
| 2yikA00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.79 | 68.0 | 3.92e-01 | 96.4% | 41.2% |
| 1wkbA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.75 | 52.0 | 4.07e-01 | 74.5% | 42.1% |
| 3ckcA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.73 | 54.0 | 3.71e-01 | 78.2% | 63.8% |
| 4nv0A02 | 1.10.150.340 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain | 0.73 | 51.0 | 4.51e-01 | 74.5% | 50.0% |
| 5ejrA01 | 1.25.40.530 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain | 0.72 | 64.0 | 4.28e-01 | 98.2% | 69.7% |
| 2qkdA02 | 2.60.120.1040 | Mainly Beta › Sandwich › Jelly Rolls › ZPR1, A/B domain | 0.71 | 57.0 | 4.26e-01 | 89.1% | 57.1% |
| 1wpbG01 | 1.10.287.680 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.71 | 50.0 | 5.05e-01 | 74.5% | 81.5% |
| 3k6tB00 | 1.20.5.4010 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.70 | 52.0 | 5.49e-01 | 80.0% | 93.9% |
| 2y4tA02 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.70 | 50.0 | 5.09e-01 | 78.2% | 98.1% |
| 1lqsL01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.69 | 56.0 | 4.69e-01 | 94.5% | 66.0% |
| 4dkcB00 | 1.20.1250.80 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-34 | 0.65 | 53.0 | 3.81e-01 | 90.9% | 46.3% |
| 4o6kA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.64 | 49.0 | 3.88e-01 | 90.9% | 47.8% |
| 2lo0A00 | 1.10.286.70 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › Get5 dimerization domain | 0.64 | 43.0 | 4.73e-01 | 70.9% | 95.6% |
| 1juqC00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 48.0 | 3.59e-01 | 85.5% | 70.5% |
| 1m4rB00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.63 | 50.0 | 3.81e-01 | 90.9% | 47.5% |
| 2wzkA03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.59 | 45.0 | 3.79e-01 | 90.9% | 100.0% |
| 1khvA05 | 1.20.960.20 | Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › | 0.59 | 42.0 | 3.68e-01 | 81.8% | 61.9% |
| 1go3F02 | 6.10.140.10 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 43.0 | 4.50e-01 | 92.7% | 97.9% |
| 1c9rB03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.56 | 44.0 | 3.98e-01 | 89.1% | 63.3% |
| 7qaqA01 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.55 | 39.0 | 2.65e-01 | 78.2% | 19.2% |
| 1ea0B03 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 40.0 | 2.42e-01 | 80.0% | 96.3% |
| 1x4oA00 | 1.10.10.790 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module | 0.53 | 36.0 | 3.26e-01 | 70.9% | 60.3% |
| 3if8B02 | 1.20.58.730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 42.0 | 3.41e-01 | 89.1% | 56.0% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4932876 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.92 | 65.0 | 4.88e-01 | 72.7% | 37.4% |
| 4943339 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.91 | 64.0 | 5.06e-01 | 72.7% | 43.0% |
| 4977068 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.91 | 64.0 | 5.00e-01 | 72.7% | 41.3% |
| 4029963 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.91 | 64.0 | 4.84e-01 | 72.7% | 34.8% |
| 5043972 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.91 | 64.0 | 5.08e-01 | 72.7% | 43.4% |
| 4463837 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.91 | 63.0 | 4.95e-01 | 72.7% | 41.0% |
| 3259397 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.90 | 63.0 | 4.80e-01 | 72.7% | 34.8% |
| 3693121 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.89 | 63.0 | 4.84e-01 | 72.7% | 36.4% |
| 3287592 | 3443.1.1.0 ↗ | alpha duplicates or obligate multimers › Get5 carboxyl domain › Get5 carboxyl domain › Get5 carboxyl domain | 0.89 | 67.0 | 6.99e-01 | 78.2% | 90.0% |
| 5024129 | 3390.1.1.0 ↗ | extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT | 0.87 | 60.0 | 6.61e-01 | 72.7% | 91.1% |
| 3487283 | 604.13.1.0 ↗ | alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like | 0.86 | 66.0 | 5.25e-01 | 80.0% | 50.0% |
| 4030521 | 604.12.1.2 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 | 0.84 | 62.0 | 5.58e-01 | 78.2% | 57.3% |
| 4977386 | 601.13.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Flagellar export chaperone FliS › Flagellar export chaperone FliS | 0.84 | 62.0 | 5.27e-01 | 78.2% | 55.3% |
| None | — | 0.83 | 61.0 | 4.16e-01 | 78.2% | 31.1% | |
| 3655933 | 604.12.1.2 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 | 0.83 | 59.0 | 4.70e-01 | 72.7% | 40.0% |
| 5001301 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.80 | 68.0 | 5.03e-01 | 92.7% | 71.1% |
| 4004336 | 2007.2.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc | 0.80 | 59.0 | 3.78e-01 | 78.2% | 56.6% |
| 3209183 | 192.31.1.0 ↗ | alpha bundles › Long alpha-hairpin › CP12 › CP12 | 0.76 | 56.0 | 5.98e-01 | 80.0% | 97.8% |
| 4954895 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.73 | 50.0 | 4.30e-01 | 72.7% | 50.0% |
| 3356293 | 192.4.1.22 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › PF26575 | 0.72 | 53.0 | 5.17e-01 | 78.2% | 95.0% |
| 5008343 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.72 | 62.0 | 5.02e-01 | 96.4% | 63.8% |
| 144301 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.67 | 48.0 | 4.45e-01 | 78.2% | 79.5% |
| 3749999 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.65 | 48.0 | 4.23e-01 | 83.6% | 55.6% |
| 3248675 | 568.1.1.0 ↗ | few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related | 0.64 | 46.0 | 4.24e-01 | 78.2% | 57.3% |
D2
medium
residues 85-138
Domain cluster:
rep: MT521998.1__QLF84112.1__SEA_JAMBALAYA_66__00066__D12-62