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OQ417972.1__WJJ56438.1__PROPHICCUG48898T2_39__00039

Bact-Vir

OQ417972.1__WJJ56438.1__PROPHICCUG48898T2_39__00039

Identity

Accession:
OQ417972 ↗
Kingdom:
phage

Quality

85.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-106
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07463.17 best NUMOD4 50.9 2.00e-13 56.6% 95.9%
D2 high residues 112-202
PDB
D3 medium residues 212-253
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gakA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 44.0 2.71e-01 83.3% 14.4%
1y02A01 1.10.720.140 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.56 44.0 3.79e-01 97.6% 51.3%
4wz2C00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.55 41.0 3.56e-01 88.1% 54.1%
1wijA00 1.10.3180.10 Mainly Alpha › Orthogonal Bundle › DNA-binding domain of ethylene- insensitive3-like3 › DNA-binding domain of EIN3-like 0.53 41.0 2.90e-01 83.3% 91.3%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5063284 376.1.5.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › AN1-like Zinc finger 0.59 40.0 4.05e-01 71.4% 77.5%
3562587 377.1.1.34 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › FAM76 0.54 36.0 3.83e-01 76.2% 100.0%