Back to structures

OQ417974.1__WJJ56548.1__PROPHICCUG48898T1_2__00001

Bact-Vir

OQ417974.1__WJJ56548.1__PROPHICCUG48898T1_2__00001

Identity

Accession:
OQ417974 ↗
Kingdom:
phage

Quality

75.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-69
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7s03A01 1.10.10.1450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.84 60.0 6.22e-01 75.5% 80.0%
1h99A02 1.10.1790.10 Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain 0.71 56.0 4.45e-01 86.8% 92.5%
1ci4A00 1.10.150.40 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Barrier-to-autointegration factor, BAF 0.70 60.0 5.17e-01 100.0% 69.3%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 58.0 5.81e-01 92.5% 96.3%
2i6xA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.68 57.0 5.25e-01 98.1% 76.1%
4jb3A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.65 54.0 5.01e-01 98.1% 79.2%
1pieA01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.64 56.0 3.75e-01 100.0% 38.9%
1sxjE03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.63 49.0 4.17e-01 90.6% 80.4%
1xriA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.63 54.0 3.97e-01 100.0% 52.3%
2ld7B00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.63 50.0 4.57e-01 94.3% 78.7%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 51.0 4.62e-01 100.0% 65.4%
4dccA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.62 52.0 4.75e-01 100.0% 82.4%
2fgyA01 1.20.120.1310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Carboxysome Shell Carbonic Anhydrase, N-terminal helical domain 0.62 47.0 3.89e-01 88.7% 48.6%
1h99A01 1.10.1790.10 Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain 0.62 47.0 3.94e-01 88.7% 90.4%
2v8pA01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.62 50.0 3.64e-01 92.5% 83.2%
2bmuB00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.61 50.0 3.42e-01 98.1% 77.4%
4jmjA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.61 52.0 3.66e-01 100.0% 93.9%
6hyyA02 1.10.150.210 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2 0.60 44.0 4.23e-01 81.1% 82.5%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 45.0 3.88e-01 98.1% 48.9%
2hzdA00 6.10.20.40 Special › Helix non-globular › Arc Repressor Mutant, subunit A › TEA/ATTS domain 0.60 50.0 4.44e-01 100.0% 73.2%
2b4lA02 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.60 51.0 3.69e-01 98.1% 66.2%
1u84A00 1.10.340.20 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain 0.59 49.0 4.38e-01 98.1% 70.4%
2b0cA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 50.0 4.69e-01 100.0% 92.4%
2lh9A00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.58 48.0 4.35e-01 100.0% 75.6%
4ezeB00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.58 49.0 3.17e-01 100.0% 58.5%
3kc2A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.58 51.0 3.61e-01 98.1% 50.0%
1wviA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.57 47.0 3.49e-01 94.3% 54.5%
3ol4A02 1.10.10.2390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.56 45.0 4.38e-01 98.1% 85.0%
2ly1A03 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.56 44.0 3.98e-01 96.2% 61.7%
2p6vA00 1.20.120.1110 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › TAFH/NHR1 domain 0.56 45.0 3.87e-01 98.1% 75.3%
2jd3A01 6.10.290.20 Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.55 37.0 3.39e-01 79.2% 47.4%
3eoqB02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.55 45.0 3.18e-01 94.3% 80.9%
1v07A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 43.0 3.60e-01 100.0% 63.6%
3kbbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.53 43.0 4.04e-01 98.1% 77.1%
4ye6A02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.53 43.0 4.23e-01 100.0% 98.3%
4qloA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 38.0 2.45e-01 86.8% 31.5%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3590733 101.1.2.489 alpha arrays › HTH › HTH › winged helix domain › Transposase_mut 0.94 65.0 6.73e-01 71.7% 76.0%
3980764 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 65.0 7.03e-01 88.7% 88.9%
3961039 101.1.3.13 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Transposase_mut 0.88 63.0 6.75e-01 75.5% 88.9%
3958338 101.1.1.266 alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut 0.88 64.0 6.90e-01 79.2% 91.1%
3958041 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 63.0 5.90e-01 94.3% 63.1%
3962597 101.1.3.13 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Transposase_mut 0.85 63.0 5.88e-01 94.3% 64.6%
3957316 101.1.1.266 alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut 0.84 63.0 5.87e-01 94.3% 64.6%
5049604 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 64.0 6.34e-01 96.2% 78.2%
3723123 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 65.0 6.30e-01 100.0% 75.0%
3908865 101.1.2.536 alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc3_2 0.83 61.0 6.11e-01 79.2% 80.0%
4978898 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 58.0 6.20e-01 75.5% 91.1%
4927588 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 64.0 5.71e-01 100.0% 60.0%
4929815 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 62.0 5.77e-01 96.2% 66.2%
4274627 101.1.1.266 alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut 0.81 65.0 6.24e-01 100.0% 76.7%
3636036 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 66.0 6.32e-01 94.3% 78.3%
3684956 101.1.1.256 alpha arrays › HTH › HTH › Three-helical HTH › Clr5 0.80 66.0 6.20e-01 100.0% 73.8%
4926838 101.43.1.0 alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain 0.80 61.0 5.73e-01 100.0% 67.7%
4014657 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 69.0 6.89e-01 100.0% 90.9%
5079851 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 60.0 5.76e-01 96.2% 71.7%
3487537 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 61.0 6.22e-01 100.0% 90.0%
5013811 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 64.0 6.39e-01 100.0% 87.3%
3909922 101.1.1.12 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 0.78 60.0 6.15e-01 94.3% 88.0%
3962579 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 69.0 5.01e-01 100.0% 37.1%
3687180 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 60.0 6.20e-01 100.0% 92.0%
3580160 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 65.0 5.64e-01 92.5% 61.3%
5029224 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 60.0 5.77e-01 100.0% 75.0%
3960847 101.1.1.266 alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut 0.77 70.0 5.13e-01 100.0% 57.7%
3597185 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 60.0 5.03e-01 84.9% 58.0%
3589089 101.1.2.489 alpha arrays › HTH › HTH › winged helix domain › Transposase_mut 0.77 69.0 5.47e-01 100.0% 71.4%
3620979 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 63.0 6.22e-01 100.0% 87.3%
3617137 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 61.0 6.03e-01 90.6% 83.6%
3618803 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 59.0 5.71e-01 90.6% 75.0%
3198858 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 62.0 5.68e-01 100.0% 68.6%
3738343 101.1.1.79 alpha arrays › HTH › HTH › Three-helical HTH › HTH_ABP1_N 0.76 62.0 5.99e-01 100.0% 80.0%
5083383 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 58.0 5.62e-01 96.2% 73.3%
3724068 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 62.0 6.15e-01 100.0% 89.1%
3740014 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 66.0 6.05e-01 100.0% 88.6%
3933926 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 61.0 5.68e-01 100.0% 72.3%
3625015 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 63.0 5.64e-01 98.1% 66.7%
4953748 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 66.0 5.89e-01 100.0% 90.7%
3997947 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 61.0 6.32e-01 92.5% 96.0%
3243611 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 55.0 5.63e-01 100.0% 86.0%
3203378 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 61.0 5.70e-01 100.0% 73.8%
5053360 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 66.0 5.60e-01 100.0% 81.2%
4952347 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 65.0 5.55e-01 100.0% 96.5%
5046292 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 56.0 4.92e-01 96.2% 55.0%
4215069 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 52.0 4.44e-01 77.4% 45.6%
5070167 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 56.0 5.62e-01 100.0% 81.8%
4995581 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.73 56.0 4.58e-01 96.2% 45.0%
3879117 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 59.0 5.84e-01 100.0% 87.3%
5006610 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 55.0 5.33e-01 100.0% 73.3%
3621273 101.43.1.0 alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain 0.72 61.0 6.08e-01 100.0% 92.7%
3740038 101.1.1.256 alpha arrays › HTH › HTH › Three-helical HTH › Clr5 0.72 52.0 5.31e-01 79.2% 84.0%
3574709 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 60.0 5.85e-01 100.0% 85.0%
4883888 102.1.1.8 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › BAF 0.71 61.0 5.23e-01 100.0% 69.3%
4666985 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 63.0 5.06e-01 100.0% 60.0%
3787144 101.1.1.8 alpha arrays › HTH › HTH › Three-helical HTH › TEA 0.70 62.0 5.51e-01 100.0% 85.3%
5008720 101.1.1.548 alpha arrays › HTH › HTH › Three-helical HTH › HTH_32 0.70 57.0 5.38e-01 100.0% 75.4%
4001884 102.1.1.8 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › BAF 0.69 59.0 5.24e-01 100.0% 75.0%
3232179 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 58.0 5.61e-01 96.2% 83.3%
5031078 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 57.0 4.67e-01 100.0% 50.0%
3465761 708.1.1.7 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › DBD_Tnp_Mut 0.68 54.0 4.07e-01 100.0% 36.2%
3958858 592.2.1.0 alpha arrays › PWI domain-like › YugE-like › YugE-like 0.67 59.0 4.45e-01 100.0% 81.5%
3488744 101.1.17.0 alpha arrays › HTH › HTH › FF domain 0.65 57.0 5.40e-01 100.0% 89.2%
3960055 592.1.1.14 alpha arrays › PWI domain-like › PWI domain › PWI domain › Transposase_mut 0.65 56.0 4.30e-01 100.0% 83.8%
3492110 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 57.0 5.40e-01 100.0% 89.2%
3454767 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 54.0 5.37e-01 98.1% 89.1%
3882993 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.64 56.0 4.08e-01 100.0% 35.3%
4237263 4964.1.1.1 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.64 50.0 3.98e-01 96.2% 40.0%
3845326 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.64 56.0 3.41e-01 100.0% 15.6%
3450729 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 52.0 4.80e-01 98.1% 70.0%
3919431 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.63 56.0 3.40e-01 100.0% 16.3%
3877946 108.1.1.30 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_8 0.63 55.0 3.41e-01 100.0% 16.7%
3517207 4218.1.1.1 alpha bundles › TAFH domain-like › TAFH domain-like › TAFH domain-like › TAFH 0.62 51.0 4.46e-01 98.1% 85.6%
4957643 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.62 52.0 3.38e-01 100.0% 40.4%
4990214 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.61 49.0 3.44e-01 94.3% 25.8%
3742721 592.6.1.1 alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › BRR2_plug 0.60 48.0 4.12e-01 100.0% 59.0%
4277752 3016.1.1.10 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › GDC-P 0.60 51.0 4.25e-01 98.1% 91.6%
5069751 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.59 51.0 3.51e-01 100.0% 97.9%
3518787 509.1.1.0 alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain 0.59 46.0 4.41e-01 94.3% 90.8%
5074088 7573.1.1.1 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.58 50.0 3.40e-01 100.0% 98.5%