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OQ417974.1__WJJ56590.1__PROPHICCUG48898T1_48__00047
Bact-VirOQ417974.1__WJJ56590.1__PROPHICCUG48898T1_48__00047
Identity
- Accession:
- OQ417974 ↗
- Kingdom:
- phage
Quality
86.3
mean pLDDT
Taxonomy
TaxID: 3032450
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 51-119
Domain cluster:
rep: NC_031108.1__YP_009290915.1__BI041_gp08__00008__D72-130
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mkyA00 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.60 | 33.0 | 3.52e-01 | 79.7% | 60.3% |
| 2ja9A02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.57 | 35.0 | 3.30e-01 | 71.0% | 48.8% |
| 2yxlA03 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.57 | 32.0 | 3.46e-01 | 87.0% | 63.8% |
| 1b96A00 | 3.40.600.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II | 0.55 | 42.0 | 2.99e-01 | 87.0% | 49.2% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.53 | 32.0 | 3.22e-01 | 79.7% | 54.9% |
| 1lh0B00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 43.0 | 3.17e-01 | 100.0% | 72.8% |
| 2fyuI00 | 2.10.210.10 | Mainly Beta › Ribbon › Cytochrome Bc1 Complex; Chain I › Cytochrome Bc1 Complex; Chain I | 0.51 | 32.0 | 3.35e-01 | 87.0% | 73.7% |
| 5i2cB01 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.51 | 40.0 | 3.20e-01 | 88.4% | 76.7% |
| 7onnA01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.50 | 36.0 | 3.65e-01 | 76.8% | 83.8% |
| 3ue3A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.50 | 39.0 | 3.52e-01 | 85.5% | 67.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4022035 | 609.1.1.0 ↗ | alpha bundles › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase | 0.59 | 37.0 | 3.21e-01 | 75.4% | 40.0% |
| 5012824 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.58 | 33.0 | 3.50e-01 | 97.1% | 63.3% |
| 3496598 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 37.0 | 3.46e-01 | 92.8% | 54.4% |
| 5049161 | 177.1.1.0 ↗ | alpha bundles › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease › Phospholipase C/P1 nuclease | 0.54 | 41.0 | 3.02e-01 | 84.1% | 82.9% |
| 3644183 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.53 | 34.0 | 3.54e-01 | 87.0% | 70.3% |
| 5008981 | 314.1.1.3 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d | 0.53 | 44.0 | 2.81e-01 | 95.7% | 24.2% |
| 3926633 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.53 | 39.0 | 2.92e-01 | 79.7% | 70.8% |
| 1297491 | 2007.6.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › PGI | 0.51 | 45.0 | 2.88e-01 | 98.6% | 23.4% |
| 4990345 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 26.0 | 3.09e-01 | 91.3% | 70.0% |
| 3966282 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 34.0 | 2.84e-01 | 71.0% | 92.1% |