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OQ417976.1__WJJ56720.1__PROPHIT461_12__00012
Bact-VirOQ417976.1__WJJ56720.1__PROPHIT461_12__00012
Identity
- Accession:
- OQ417976 ↗
- Kingdom:
- phage
Quality
74.9
mean pLDDT
Taxonomy
TaxID: 3032455
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-107
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.81 | 46.0 | 5.76e-01 | 92.0% | 90.9% |
| 1xx6A02 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.64 | 33.0 | 4.46e-01 | 90.9% | 97.8% |
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.61 | 35.0 | 4.18e-01 | 76.1% | 83.3% |
| 4bluB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 47.0 | 3.38e-01 | 96.6% | 93.1% |
| 2oo3A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 46.0 | 3.38e-01 | 96.6% | 95.5% |
| 2jfdA03 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.52 | 37.0 | 4.16e-01 | 100.0% | 100.0% |
| 1cnzA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.52 | 41.0 | 2.73e-01 | 85.2% | 92.6% |
| 2cq0A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 36.0 | 3.51e-01 | 75.0% | 78.6% |
| 1wltA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 38.0 | 3.07e-01 | 78.4% | 88.6% |
| 1t6aA02 | 3.30.310.120 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein | 0.51 | 39.0 | 4.11e-01 | 88.6% | 92.3% |
| 1jb0D00 | 3.30.1470.10 | Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II | 0.50 | 40.0 | 3.51e-01 | 94.3% | 56.5% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3950995 | 3380.1.1.0 ↗ | a+b duplicates or obligate multimers › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 | 0.75 | 67.0 | 6.89e-01 | 98.9% | 100.0% |
| 3202665 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 33.0 | 3.27e-01 | 75.0% | 49.5% |
| 411813 | 3335.1.1.2 ↗ | beta barrels › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › TbpB_A | 0.56 | 41.0 | 3.78e-01 | 76.1% | 75.4% |
| 3990391 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 44.0 | 2.94e-01 | 89.8% | 43.3% |
| 3951840 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.53 | 38.0 | 2.83e-01 | 76.1% | 41.6% |
| 3508351 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.51 | 32.0 | 2.77e-01 | 78.4% | 36.0% |
| 4951473 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.51 | 32.0 | 3.70e-01 | 77.3% | 90.5% |
| 1145963 | 4012.3.1.1 ↗ | a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 › Cas9_PI | 0.50 | 39.0 | 3.78e-01 | 85.2% | 86.0% |