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OQ417976.1__WJJ56734.1__PROPHIT461_26__00026

Bact-Vir

OQ417976.1__WJJ56734.1__PROPHIT461_26__00026

Identity

Accession:
OQ417976 ↗
Kingdom:
phage

Quality

88.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 45-119
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4whiA00 2.40.128.600 Mainly Beta › Beta Barrel › Lipocalin › 0.69 49.0 4.43e-01 86.7% 54.9%
6fopA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.65 46.0 3.31e-01 80.0% 24.8%
3wjcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 53.0 4.16e-01 89.3% 66.7%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 44.0 3.74e-01 72.0% 89.0%
4kc7A02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.64 51.0 4.69e-01 89.3% 87.9%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.63 49.0 3.90e-01 84.0% 73.4%
5cfvA01 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.63 57.0 5.01e-01 98.7% 86.0%
1z24A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 52.0 3.91e-01 92.0% 89.4%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.62 49.0 3.75e-01 85.3% 41.8%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 47.0 3.78e-01 82.7% 85.8%
2x9aA00 2.30.27.10 Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain 0.62 42.0 4.63e-01 100.0% 86.9%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.61 45.0 4.10e-01 82.7% 58.0%
3pu2B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 51.0 4.17e-01 97.3% 79.7%
1tw0A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 48.0 3.87e-01 89.3% 43.3%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 53.0 4.40e-01 98.7% 80.5%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 46.0 3.72e-01 89.3% 42.8%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 52.0 4.33e-01 97.3% 78.4%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 44.0 3.70e-01 80.0% 55.7%
4g2sA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.59 44.0 3.94e-01 78.7% 91.5%
7nn3B01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 40.0 2.67e-01 70.7% 30.5%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.59 51.0 3.91e-01 98.7% 65.8%
1jyoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.58 47.0 3.94e-01 88.0% 86.2%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.58 44.0 3.71e-01 84.0% 66.9%
2pcsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 50.0 4.07e-01 100.0% 76.3%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 48.0 3.62e-01 92.0% 65.6%
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.57 50.0 4.52e-01 98.7% 91.3%
4oocA00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.56 41.0 2.87e-01 78.7% 82.1%
1xuvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 46.0 3.72e-01 97.3% 76.7%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 46.0 3.92e-01 100.0% 79.4%
6ka3A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 46.0 3.85e-01 98.7% 80.3%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.55 46.0 3.88e-01 98.7% 71.9%
1xn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 46.0 3.86e-01 97.3% 69.6%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 43.0 4.36e-01 89.3% 94.7%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 45.0 3.82e-01 97.3% 73.3%
2wjsA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 3.52e-01 94.7% 56.6%
3sh4A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 3.37e-01 93.3% 47.7%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 44.0 4.41e-01 90.7% 89.5%
2zylA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.54 46.0 3.36e-01 96.0% 56.7%
7zgmA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 46.0 3.28e-01 98.7% 84.4%
5ee2A00 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.53 42.0 3.67e-01 90.7% 73.8%
6sulA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 41.0 3.74e-01 88.0% 94.4%
5iu1B00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 45.0 3.96e-01 97.3% 92.0%
3dxpA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 42.0 3.94e-01 88.0% 100.0%
3ijtB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 44.0 3.67e-01 98.7% 73.4%
1qu0C00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.32e-01 93.3% 49.2%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.51 38.0 3.57e-01 100.0% 62.2%
5gv0A00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.51 40.0 3.27e-01 90.7% 79.0%
2nn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 43.0 3.44e-01 100.0% 63.2%
1n08A00 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.51 39.0 3.20e-01 97.3% 42.2%
1jy1A01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.51 43.0 3.28e-01 100.0% 72.4%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.51 37.0 3.21e-01 78.7% 83.3%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.50 41.0 3.11e-01 92.0% 96.4%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4890877 220.1.1.14 beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom 0.72 46.0 3.70e-01 70.7% 36.8%
3695635 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.64 49.0 4.70e-01 82.7% 82.2%
4542151 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.64 58.0 3.67e-01 100.0% 30.1%
3915934 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.63 57.0 3.56e-01 100.0% 22.3%
3209928 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 51.0 3.12e-01 89.3% 25.5%
853 9.1.1.23 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3598_N 0.62 45.0 3.76e-01 77.3% 56.8%
3508282 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.62 56.0 3.53e-01 100.0% 21.3%
1063623 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.61 54.0 4.38e-01 97.3% 79.9%
4954761 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.61 46.0 3.84e-01 78.7% 64.2%
2764515 7579.1.1.49 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › GCE_fung 0.60 41.0 2.65e-01 70.7% 26.1%
3821141 5.1.4.550 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.60 47.0 3.15e-01 84.0% 32.0%
3973416 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 48.0 3.11e-01 89.3% 26.9%
4956062 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.60 48.0 4.04e-01 88.0% 82.9%
3283094 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.59 51.0 3.84e-01 98.7% 48.7%
5040587 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.59 51.0 4.12e-01 100.0% 72.3%
3717196 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.58 50.0 3.64e-01 100.0% 52.0%
3802525 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 45.0 2.94e-01 84.0% 30.7%
5053461 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.58 51.0 3.93e-01 100.0% 62.9%
3985160 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.58 50.0 4.35e-01 96.0% 84.3%
4964031 7089.1.1.7 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF7543 0.58 39.0 4.10e-01 85.3% 75.7%
5038572 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.58 49.0 4.02e-01 100.0% 73.3%
3288437 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.58 50.0 4.08e-01 100.0% 74.0%
3587042 331.3.1.32 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF3284 0.57 51.0 4.19e-01 98.7% 76.3%
4209630 331.3.1.20 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C 0.57 50.0 3.67e-01 100.0% 64.8%
3227816 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.57 40.0 2.87e-01 76.0% 35.1%
4323155 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.57 47.0 4.32e-01 94.7% 75.0%
None 0.56 45.0 3.16e-01 89.3% 39.6%
3935896 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.56 48.0 4.09e-01 100.0% 56.9%
4228206 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.56 47.0 4.68e-01 97.3% 96.2%
4992060 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.56 42.0 3.25e-01 90.7% 34.9%
5043414 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.56 49.0 4.09e-01 100.0% 83.0%
3225336 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.56 45.0 3.67e-01 89.3% 54.5%
3934561 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.55 47.0 3.77e-01 98.7% 50.0%
3288440 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.55 48.0 3.91e-01 98.7% 57.9%
3442039 5.1.4.15 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 0.55 46.0 3.14e-01 92.0% 30.4%
4964630 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.55 47.0 3.90e-01 98.7% 76.2%
3600669 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.55 44.0 3.87e-01 92.0% 57.5%
3439826 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.55 45.0 3.80e-01 100.0% 62.7%
4024746 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.55 46.0 3.38e-01 98.7% 56.1%
3952792 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.55 46.0 3.80e-01 98.7% 56.0%
5083330 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.55 47.0 2.81e-01 100.0% 17.0%
3663339 331.4.1.7 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › DUF1499 0.54 46.0 3.70e-01 97.3% 65.2%
3282063 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.54 44.0 3.80e-01 93.3% 73.6%
4980708 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 46.0 3.82e-01 100.0% 75.7%
4214150 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.53 38.0 3.45e-01 98.7% 53.6%
None 0.52 42.0 2.79e-01 89.3% 28.6%
4963337 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.52 44.0 3.79e-01 98.7% 89.2%
370870 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.52 44.0 3.72e-01 98.7% 76.6%
3274430 12.3.1.40 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N 0.52 44.0 3.19e-01 93.3% 44.3%
3284176 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.52 44.0 3.86e-01 100.0% 70.0%
3283627 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.51 43.0 3.58e-01 100.0% 73.3%
3716580 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 43.0 3.56e-01 100.0% 93.3%
4963695 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 43.0 3.92e-01 100.0% 83.6%
3438388 331.4.1.2 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.51 43.0 3.59e-01 97.3% 53.3%
4996248 331.19.1.0 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains 0.51 40.0 3.85e-01 97.3% 75.6%
4954243 300.1.1.7 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PP_kinase_C 0.50 44.0 3.40e-01 100.0% 75.0%
3591435 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.50 42.0 3.46e-01 98.7% 91.0%
3953943 9.27.1.1 beta barrels › Lipocalins/Streptavidin › LpqH › LpqH › Myco_19_kDa 0.50 42.0 3.83e-01 98.7% 83.6%
3953302 331.2.1.1 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.50 42.0 3.85e-01 98.7% 74.0%