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OQ417976.1__WJJ56743.1__PROPHIT461_35__00035

Bact-Vir

OQ417976.1__WJJ56743.1__PROPHIT461_35__00035

Identity

Accession:
OQ417976 ↗
Kingdom:
phage

Quality

89.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-115_120-133
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2z7rA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.69 38.0 4.57e-01 81.3% 79.8%
1ywuA00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.69 43.0 4.33e-01 82.9% 61.6%
2nwaA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.68 38.0 4.76e-01 75.6% 89.3%
2e8yA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.68 36.0 3.96e-01 81.3% 61.4%
6bfnA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.68 38.0 4.39e-01 80.5% 74.2%
5hesA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 36.0 4.36e-01 81.3% 80.2%
2rdeA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.66 44.0 4.68e-01 83.7% 75.7%
4wovA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 38.0 4.54e-01 80.5% 83.3%
8fd9A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 37.0 4.61e-01 79.7% 89.6%
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.65 39.0 4.49e-01 80.5% 83.5%
2clqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 38.0 4.46e-01 81.3% 82.4%
1zysA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 39.0 4.41e-01 81.3% 77.9%
4l68A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 37.0 3.97e-01 80.5% 63.6%
2vz6B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 39.0 4.63e-01 80.5% 89.2%
5xd6B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 36.0 4.07e-01 80.5% 71.3%
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.64 41.0 4.96e-01 76.4% 100.0%
4yo1A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.64 39.0 4.44e-01 81.3% 83.1%
2d37A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 51.0 4.65e-01 82.9% 78.1%
2hw6A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 38.0 4.43e-01 80.5% 83.0%
3nfwA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 50.0 4.39e-01 82.9% 68.2%
4f07E00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 50.0 4.67e-01 82.9% 79.9%
1uscA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 50.0 4.34e-01 82.9% 69.7%
1rz1A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 49.0 4.58e-01 82.9% 78.9%
1ejeA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 49.0 4.21e-01 82.9% 67.2%
5ajqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 36.0 4.18e-01 80.5% 80.2%
2ecuA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 49.0 4.61e-01 82.9% 76.5%
4l82A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 49.0 4.51e-01 82.9% 78.2%
2c47A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 34.0 4.30e-01 81.3% 90.4%
4xhyA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 49.0 4.45e-01 82.9% 75.2%
2r6vA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 49.0 4.42e-01 82.9% 78.0%
3mdyA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 37.0 3.95e-01 81.3% 67.3%
1havB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.62 44.0 4.71e-01 80.5% 87.4%
6f2mA02 2.40.30.290 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.61 36.0 4.17e-01 75.6% 81.6%
3cb0D00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 48.0 4.41e-01 82.9% 78.3%
5d9hA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 36.0 4.24e-01 80.5% 83.0%
4myjA05 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 36.0 4.21e-01 79.7% 81.8%
3f1sB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 40.0 4.49e-01 81.3% 87.1%
6toaE01 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.61 45.0 4.96e-01 75.6% 100.0%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.61 42.0 4.28e-01 82.9% 72.1%
4redB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 36.0 4.34e-01 79.7% 88.1%
2vd5B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 38.0 3.25e-01 82.1% 41.2%
3bnkA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 47.0 4.06e-01 82.9% 67.2%
2furB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 47.0 4.02e-01 82.9% 68.9%
2nr4A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 46.0 4.54e-01 82.9% 85.7%
3b5mA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 46.0 4.70e-01 82.9% 94.1%
2ynaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 38.0 4.40e-01 80.5% 93.2%
4h05B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 33.0 3.81e-01 79.7% 75.8%
2zu2A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 38.0 4.19e-01 80.5% 82.7%
2dylA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 33.0 3.76e-01 81.3% 76.9%
4ympA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 37.0 3.84e-01 84.6% 75.0%
1l1jA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 41.0 4.17e-01 82.9% 83.9%
3irzA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 34.0 3.82e-01 79.7% 83.8%
3upuA03 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.51 38.0 3.79e-01 89.4% 74.8%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3977079 1.1.12.0 beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins 0.73 43.0 4.46e-01 82.1% 62.6%
4033712 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.70 47.0 5.58e-01 74.8% 100.0%
77 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.69 46.0 4.86e-01 83.7% 75.5%
192 1.1.9.13 beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF2584 0.68 38.0 4.66e-01 75.6% 84.8%
3243970 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 42.0 4.57e-01 76.4% 77.0%
261 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.65 47.0 3.92e-01 81.3% 43.4%
3799367 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.65 39.0 2.69e-01 82.1% 18.7%
3719164 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.62 44.0 3.83e-01 90.2% 47.4%
3257612 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.58 47.0 4.01e-01 85.4% 88.7%
3409552 60.1.1.2 beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Med25 0.56 46.0 4.42e-01 89.4% 95.9%
4210866 319.1.1.4 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.56 37.0 4.35e-01 87.0% 97.6%
5063052 11.1.1.1410 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CarboxypepD_reg 0.55 32.0 3.73e-01 80.5% 80.0%
3718208 1.1.7.6 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.54 41.0 3.86e-01 84.6% 65.5%
4991285 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.53 30.0 3.64e-01 80.5% 85.0%
3224728 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 36.0 3.76e-01 78.9% 77.4%
3625475 206.1.1.74 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr 0.50 39.0 2.79e-01 82.1% 36.4%