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OQ436456.1__WEU67321.1__X__00054
Bact-VirOQ436456.1__WEU67321.1__X__00054
Identity
- Accession:
- OQ436456 ↗
- Kingdom:
- phage
Quality
90.1
mean pLDDT
Cluster
View cluster (15 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-87
Domain cluster:
rep: Mad1_20_16_scaffold_0_curated_closed_complete_start-adj_prodigal-single.1__X__X__00491__D28-102
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00625.28 best | Guanylate_kin | 41.9 | 1.20e-10 | 97.7% | 43.4% |
D2
high
residues 95-171
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jaqA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 50.0 | 3.84e-01 | 96.1% | 39.2% |
| 4mqbB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 49.0 | 3.73e-01 | 100.0% | 37.9% |
| 6b8hO01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.56 | 38.0 | 3.51e-01 | 84.4% | 54.5% |
| 5cgzA00 | 3.40.50.10320 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like | 0.55 | 44.0 | 3.11e-01 | 97.4% | 27.9% |
| 8dtpC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 43.0 | 3.08e-01 | 87.0% | 86.6% |
| 5ywwA01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.54 | 43.0 | 3.87e-01 | 93.5% | 61.7% |
| 4wv4B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.51 | 39.0 | 3.65e-01 | 80.5% | 86.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3602251 | 6132.1.1.0 ↗ | alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain | 0.70 | 48.0 | 4.71e-01 | 93.5% | 64.7% |
| 4254912 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.70 | 54.0 | 4.17e-01 | 96.1% | 36.6% |
| 4652309 | 2004.1.1.105 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinase-PPPase | 0.64 | 53.0 | 4.33e-01 | 100.0% | 49.0% |
| 4314340 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.64 | 54.0 | 4.11e-01 | 100.0% | 40.0% |
| 2488226 | 2005.1.1.24 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DPRP | 0.61 | 50.0 | 4.25e-01 | 89.6% | 82.7% |
| 4937880 | 2004.1.1.191 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 | 0.60 | 49.0 | 3.83e-01 | 96.1% | 41.4% |
| 5010661 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 49.0 | 4.06e-01 | 100.0% | 50.0% |
| 3273940 | 2004.1.1.70 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › dNK | 0.59 | 50.0 | 3.78e-01 | 100.0% | 37.1% |
| 3847053 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.58 | 40.0 | 4.09e-01 | 71.4% | 94.7% |
| 4972761 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 47.0 | 3.45e-01 | 100.0% | 31.1% |
| 4039122 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.56 | 46.0 | 3.64e-01 | 100.0% | 41.1% |
| None | — | 0.56 | 46.0 | 3.63e-01 | 100.0% | 40.6% | |
| 4355835 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.55 | 46.0 | 3.62e-01 | 100.0% | 42.2% |
| 4075863 | 2004.1.1.106 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RapZ-like_N | 0.55 | 45.0 | 3.62e-01 | 100.0% | 43.6% |
| 4535526 | 2004.1.1.106 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RapZ-like_N | 0.55 | 45.0 | 3.64e-01 | 98.7% | 45.0% |
| 3891375 | 2004.1.1.122 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IIGP | 0.52 | 44.0 | 3.21e-01 | 98.7% | 80.0% |
| 4172297 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 43.0 | 3.41e-01 | 97.4% | 56.1% |
| 3352144 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.51 | 32.0 | 2.96e-01 | 92.2% | 47.0% |
| 4428904 | 2004.1.1.439 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF26341 | 0.50 | 41.0 | 3.63e-01 | 98.7% | 83.1% |
| 3722086 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 42.0 | 2.70e-01 | 96.1% | 35.2% |