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OQ436456.1__WEU67327.1__X__00060
Bact-VirOQ436456.1__WEU67327.1__X__00060
Identity
- Accession:
- OQ436456 ↗
- Kingdom:
- phage
Quality
87.7
mean pLDDT
Cluster
View cluster (68 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-150
Domain cluster:
rep: MG752970.1__AVH85374.1__RsoM2USA_446__00446__D13-175
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07726.18 best | AAA_3 | 34.5 | 2.40e-08 | 97.3% | 82.4% |
| PF07728.21 | AAA_5 | 72.1 | 6.60e-20 | 90.4% | 89.2% |
D2
high
residues 156-212
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xb2B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.75 | 55.0 | 5.40e-01 | 100.0% | 73.3% |
| 2l2dA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.75 | 53.0 | 4.92e-01 | 98.2% | 58.9% |
| 2l4eA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.74 | 52.0 | 5.23e-01 | 98.2% | 73.7% |
| 4lzjA02 | 1.10.8.1080 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.73 | 51.0 | 4.59e-01 | 98.2% | 53.2% |
| 2dzlA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.73 | 51.0 | 4.88e-01 | 98.2% | 63.6% |
| 7vwtA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.71 | 50.0 | 3.10e-01 | 73.7% | 16.2% |
| 1ez0B01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.71 | 52.0 | 3.22e-01 | 77.2% | 38.1% |
| 1ixkA01 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.68 | 44.0 | 3.60e-01 | 87.7% | 36.2% |
| 3kyeA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.66 | 57.0 | 4.51e-01 | 96.5% | 62.2% |
| 3w0lD01 | 1.10.8.1080 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 54.0 | 4.52e-01 | 98.2% | 52.5% |
| 1iuqA01 | 1.10.1200.50 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal | 0.65 | 55.0 | 5.07e-01 | 96.5% | 80.3% |
| 1y1aA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.65 | 56.0 | 4.80e-01 | 100.0% | 94.8% |
| 1i12D00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 47.0 | 3.45e-01 | 82.5% | 54.1% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 52.0 | 4.71e-01 | 98.2% | 74.4% |
| 1vi0A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 44.0 | 3.37e-01 | 80.7% | 33.8% |
| 3wvoC02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.58 | 46.0 | 3.73e-01 | 96.5% | 61.5% |
| 2hpsA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.58 | 52.0 | 3.56e-01 | 98.2% | 35.3% |
| 2ccmA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.58 | 51.0 | 3.54e-01 | 100.0% | 33.7% |
| 7m2wE01 | 1.20.120.1900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain | 0.57 | 48.0 | 3.11e-01 | 100.0% | 95.5% |
| 6zhiB02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 48.0 | 4.23e-01 | 93.0% | 71.1% |
| 1w36C04 | 1.10.486.10 | Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 | 0.56 | 46.0 | 3.25e-01 | 100.0% | 29.2% |
| 1gq2A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 49.0 | 3.06e-01 | 98.2% | 21.3% |
| 4fidA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 46.0 | 3.29e-01 | 100.0% | 92.7% |
| 6gwuD00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.52 | 46.0 | 3.15e-01 | 100.0% | 32.2% |
| 6pnuB01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 44.0 | 2.84e-01 | 98.2% | 83.9% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3944791 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.93 | 88.0 | 7.36e-01 | 100.0% | 64.4% |
| 4042777 | 148.1.3.4 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › CbbQ_C | 0.89 | 82.0 | 6.84e-01 | 100.0% | 62.2% |
| 4948085 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.88 | 81.0 | 6.59e-01 | 100.0% | 67.0% |
| 4147448 | 148.1.3.4 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › CbbQ_C | 0.87 | 80.0 | 6.76e-01 | 100.0% | 65.6% |
| 5002943 | 148.1.3.4 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › CbbQ_C | 0.87 | 80.0 | 6.74e-01 | 100.0% | 65.6% |
| 3405538 | 219.1.1.111 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core, Rad4 | 0.76 | 56.0 | 3.52e-01 | 78.9% | 15.6% |
| 3505931 | 6130.1.1.0 ↗ | alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain | 0.75 | 68.0 | 6.33e-01 | 100.0% | 85.7% |
| 3022565 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.73 | 50.0 | 5.62e-01 | 96.5% | 100.0% |
| 3648390 | 103.2.1.3 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › PF28345 | 0.72 | 66.0 | 5.56e-01 | 98.2% | 62.2% |
| 4886437 | 6130.1.1.0 ↗ | alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain | 0.71 | 62.0 | 5.87e-01 | 100.0% | 91.4% |
| 2420884 | 602.1.1.4 ↗ | alpha arrays › L-aspartase middle domain-like › L-aspartase middle domain-like › L-aspartase middle domain-like › ADSL_C | 0.70 | 57.0 | 4.52e-01 | 91.2% | 44.2% |
| 3547829 | 6157.1.1.1 ↗ | alpha bundles › GKAP homology domain 1 › GKAP homology domain 1 › GKAP homology domain 1 › GKAP | 0.69 | 50.0 | 4.05e-01 | 77.2% | 78.2% |
| 4422279 | 6130.1.1.1 ↗ | alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Se-cys_synth_N | 0.69 | 61.0 | 5.58e-01 | 100.0% | 89.3% |
| 4962718 | 148.1.3.412 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF26484 | 0.67 | 60.0 | 5.24e-01 | 100.0% | 97.6% |
| 3569469 | 7529.1.1.10 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › AKAP_110 | 0.66 | 54.0 | 3.72e-01 | 94.7% | 53.0% |
| 2731713 | 148.1.3.203 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF28760 | 0.63 | 53.0 | 4.29e-01 | 100.0% | 89.0% |
| 5004343 | 2498.5.1.0 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like | 0.63 | 54.0 | 4.51e-01 | 94.7% | 80.0% |
| 3817587 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.61 | 51.0 | 5.16e-01 | 100.0% | 96.4% |
| 3691781 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.61 | 50.0 | 3.40e-01 | 89.5% | 46.0% |
| 3916975 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.60 | 43.0 | 4.14e-01 | 73.7% | 86.2% |
| 4663861 | 5069.1.3.78 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › MIS13 | 0.60 | 42.0 | 3.86e-01 | 75.4% | 63.7% |
| 3250288 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 41.0 | 3.40e-01 | 77.2% | 43.0% |
| 3643148 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.55 | 44.0 | 4.51e-01 | 100.0% | 96.4% |
| 3537242 | 101.1.2.34 ↗ | alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding | 0.54 | 37.0 | 3.20e-01 | 73.7% | 59.0% |
| 3839757 | 378.1.1.20 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › DUF1524 | 0.53 | 41.0 | 3.25e-01 | 87.7% | 66.2% |
| 3318623 | 610.3.1.0 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain | 0.53 | 44.0 | 4.37e-01 | 100.0% | 95.0% |