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OQ436456.1__WEU67336.1__X__00069
Bact-VirOQ436456.1__WEU67336.1__X__00069
Identity
- Accession:
- OQ436456 ↗
- Kingdom:
- phage
Quality
87.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-102
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17657.7 best | DNA_pol3_finger | 86.9 | 1.40e-24 | 82.3% | 50.0% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ysmA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.64 | 51.0 | 3.48e-01 | 85.3% | 34.1% |
| 1zq1C03 | 1.10.150.380 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › GatB domain, N-terminal subdomain | 0.62 | 30.0 | 3.89e-01 | 76.5% | 82.5% |
| 4xaxB02 | 1.20.58.1290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain | 0.60 | 45.0 | 4.61e-01 | 79.4% | 97.0% |
| 2v5cA03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.56 | 42.0 | 3.94e-01 | 80.4% | 97.7% |
| 3s63A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.56 | 35.0 | 3.69e-01 | 82.4% | 71.6% |
| 4ga6A02 | 1.20.970.50 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › | 0.55 | 41.0 | 3.57e-01 | 78.4% | 84.2% |
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.54 | 46.0 | 4.12e-01 | 97.1% | 99.3% |
| 6a7hA01 | 1.20.140.180 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.54 | 35.0 | 3.21e-01 | 78.4% | 49.2% |
| 5kf6A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.53 | 43.0 | 3.15e-01 | 86.3% | 68.6% |
| 2zcxA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 39.0 | 3.08e-01 | 81.4% | 39.0% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 38.0 | 3.82e-01 | 78.4% | 93.4% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4096085 | 3584.1.1.1 ↗ | alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA_pol3_finger | 0.97 | 85.0 | 6.44e-01 | 100.0% | 44.3% |
| 4411663 | 3584.1.1.1 ↗ | alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA_pol3_finger | 0.96 | 91.0 | 6.66e-01 | 100.0% | 43.0% |
| 4158759 | 3584.1.1.1 ↗ | alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA_pol3_finger | 0.95 | 92.0 | 6.74e-01 | 100.0% | 44.8% |
| 4522025 | 3584.1.1.1 ↗ | alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA_pol3_finger | 0.95 | 90.0 | 6.84e-01 | 100.0% | 48.1% |
| 4093848 | 3584.1.1.1 ↗ | alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA_pol3_finger | 0.91 | 85.0 | 6.50e-01 | 100.0% | 48.1% |
| 4257959 | 3584.1.1.1 ↗ | alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA_pol3_finger | 0.88 | 75.0 | 5.93e-01 | 100.0% | 47.9% |
| 3969382 | 3584.1.1.0 ↗ | alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain | 0.83 | 77.0 | 5.97e-01 | 100.0% | 48.6% |
| 5022856 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.67 | 37.0 | 3.52e-01 | 82.4% | 44.4% |
| 3617514 | 7014.1.1.0 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain | 0.61 | 42.0 | 4.01e-01 | 100.0% | 60.0% |
| 4408360 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.56 | 39.0 | 2.81e-01 | 73.5% | 83.4% |
| 4580956 | 2484.1.1.222 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UPF0236 | 0.53 | 46.0 | 3.60e-01 | 99.0% | 72.8% |
| 3812310 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.52 | 44.0 | 3.96e-01 | 98.0% | 99.4% |