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OQ436456.1__WEU67436.1__X__00169
Bact-VirOQ436456.1__WEU67436.1__X__00169
Identity
- Accession:
- OQ436456 ↗
- Kingdom:
- phage
Quality
66.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-88
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bz6A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 36.0 | 3.45e-01 | 77.3% | 43.6% |
| 3p9aF00 | 1.10.132.80 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.65 | 35.0 | 2.74e-01 | 89.4% | 25.4% |
| 1g59A03 | 3.90.800.10 | Alpha Beta › Alpha-Beta Complex › Glutamyl-tRNA Synthetase; domain 3 › Glutamyl-tRNA Synthetase; Domain 3 | 0.62 | 44.0 | 3.80e-01 | 78.8% | 56.9% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 42.0 | 4.23e-01 | 77.3% | 93.9% |
| 6dgiA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.56 | 40.0 | 4.03e-01 | 75.8% | 83.8% |
| 5mz2I00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.55 | 40.0 | 3.24e-01 | 78.8% | 52.5% |
| 1dkiC01 | 3.90.70.50 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) | 0.55 | 43.0 | 3.24e-01 | 92.4% | 70.6% |
| 1uenA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 36.0 | 3.03e-01 | 71.2% | 62.4% |
| 1fznD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 36.0 | 2.93e-01 | 78.8% | 38.8% |
| 4q0yA00 | 2.60.40.4400 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 45.0 | 3.66e-01 | 98.5% | 85.5% |
| 1gsaA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.53 | 37.0 | 3.73e-01 | 75.8% | 89.2% |
| 3kyfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 37.0 | 3.21e-01 | 77.3% | 64.9% |
| 4b3fX02 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.52 | 44.0 | 3.86e-01 | 92.4% | 79.6% |
| 2g1lA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.51 | 39.0 | 3.44e-01 | 84.8% | 90.3% |
| 4kqdB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 41.0 | 3.44e-01 | 89.4% | 71.6% |
| 3daoA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.51 | 35.0 | 3.10e-01 | 75.8% | 64.2% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5023773 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.67 | 38.0 | 2.78e-01 | 77.3% | 21.1% |
| 5062623 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.63 | 43.0 | 3.19e-01 | 71.2% | 31.4% |
| 5053225 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 47.0 | 4.16e-01 | 83.3% | 86.0% |
| 3290160 | 4.1.1.323 ↗ | beta barrels › SH3 › SH3 › SH3 › WYL | 0.61 | 46.0 | 4.38e-01 | 83.3% | 90.0% |
| 4927532 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.61 | 42.0 | 3.51e-01 | 74.2% | 60.0% |
| 3184022 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.58 | 47.0 | 3.88e-01 | 92.4% | 89.2% |
| 3187199 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.58 | 43.0 | 3.39e-01 | 78.8% | 65.2% |
| 4029680 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.57 | 44.0 | 3.22e-01 | 81.8% | 94.9% |
| 3325376 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.55 | 39.0 | 3.86e-01 | 75.8% | 95.7% |
| 3228172 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.55 | 41.0 | 2.98e-01 | 81.8% | 66.5% |
| 3220832 | 592.7.1.1 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 | 0.55 | 49.0 | 4.43e-01 | 100.0% | 100.0% |
| 3730174 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.53 | 42.0 | 3.58e-01 | 87.9% | 92.7% |
| 4120485 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.53 | 43.0 | 2.64e-01 | 87.9% | 55.4% |
| 3257528 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 39.0 | 3.50e-01 | 83.3% | 84.0% |
| 3688440 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.50 | 36.0 | 3.15e-01 | 78.8% | 90.0% |