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OQ436456.1__WEU67481.1__X__00214

Bact-Vir

OQ436456.1__WEU67481.1__X__00214

Identity

Accession:
OQ436456 ↗
Kingdom:
phage

Quality

90.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Xanthomonas_phage_JGB6

TaxID: 3032414

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-57
PDB
Domain cluster: rep: OM223115.1__UKL14919.1__hairong_013__00013__D3-70
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nkgA00 2.60.120.790 Mainly Beta › Sandwich › Jelly Rolls › 0.57 44.0 3.17e-01 90.4% 77.6%
4dunA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.54 40.0 3.19e-01 86.5% 63.8%
1wu2A01 3.40.980.10 Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › MoaB/Mog-like domain 0.53 36.0 2.77e-01 76.9% 88.1%
1owqA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.52 39.0 3.68e-01 88.5% 98.5%
1gu2A00 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.51 42.0 3.25e-01 94.2% 66.1%
2zyzB02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.50 37.0 3.21e-01 86.5% 78.9%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5045981 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.57 43.0 4.35e-01 94.2% 88.7%
3729229 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.52 38.0 2.40e-01 78.8% 28.4%
5072957 873.1.1.1 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R 0.52 39.0 2.91e-01 86.5% 54.9%